Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhgb5Q91XX5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.43■■□□□ 1.18
Pcdhgb5Q91XX5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgb5Q91XX5 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.42■■□□□ 1.18
Pcdhgb5Q91XX5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Pcdhgb5Q91XX5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Pcdhgb5Q91XX5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Pcdhgb5Q91XX5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgb5Q91XX5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.41■■□□□ 1.18
Pcdhgb5Q91XX5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Pcdhgb5Q91XX5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhgb5Q91XX5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhgb5Q91XX5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Pcdhgb5Q91XX5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhgb5Q91XX5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhgb5Q91XX5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgb5Q91XX5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.38■■□□□ 1.17
Pcdhgb5Q91XX5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgb5Q91XX5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgb5Q91XX5 Gm15546-201ENSMUST00000122095 826 ntBASIC22.37■■□□□ 1.17
Pcdhgb5Q91XX5 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.37■■□□□ 1.17
Pcdhgb5Q91XX5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Pcdhgb5Q91XX5 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgb5Q91XX5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgb5Q91XX5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgb5Q91XX5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgb5Q91XX5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgb5Q91XX5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgb5Q91XX5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgb5Q91XX5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Pcdhgb5Q91XX5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Pcdhgb5Q91XX5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgb5Q91XX5 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhgb5Q91XX5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Pcdhgb5Q91XX5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhgb5Q91XX5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhgb5Q91XX5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgb5Q91XX5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Pcdhgb5Q91XX5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgb5Q91XX5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgb5Q91XX5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgb5Q91XX5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhgb5Q91XX5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhgb5Q91XX5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhgb5Q91XX5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhgb5Q91XX5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.33■■□□□ 1.17
Pcdhgb5Q91XX5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.33■■□□□ 1.17
Pcdhgb5Q91XX5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Pcdhgb5Q91XX5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhgb5Q91XX5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhgb5Q91XX5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhgb5Q91XX5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Pcdhgb5Q91XX5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.31■■□□□ 1.16
Pcdhgb5Q91XX5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhgb5Q91XX5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhgb5Q91XX5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.3■■□□□ 1.16
Pcdhgb5Q91XX5 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.3■■□□□ 1.16
Pcdhgb5Q91XX5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhgb5Q91XX5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhgb5Q91XX5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Pcdhgb5Q91XX5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhgb5Q91XX5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhgb5Q91XX5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhgb5Q91XX5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.29■■□□□ 1.16
Pcdhgb5Q91XX5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Pcdhgb5Q91XX5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Pcdhgb5Q91XX5 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.28■■□□□ 1.16
Pcdhgb5Q91XX5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.28■■□□□ 1.16
Pcdhgb5Q91XX5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhgb5Q91XX5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.28■■□□□ 1.16
Pcdhgb5Q91XX5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhgb5Q91XX5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhgb5Q91XX5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhgb5Q91XX5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Pcdhgb5Q91XX5 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhgb5Q91XX5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhgb5Q91XX5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Pcdhgb5Q91XX5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhgb5Q91XX5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.27■■□□□ 1.16
Pcdhgb5Q91XX5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhgb5Q91XX5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.26■■□□□ 1.15
Pcdhgb5Q91XX5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgb5Q91XX5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgb5Q91XX5 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Pcdhgb5Q91XX5 Gm43566-201ENSMUST00000196851 808 ntBASIC22.25■■□□□ 1.15
Pcdhgb5Q91XX5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgb5Q91XX5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgb5Q91XX5 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgb5Q91XX5 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgb5Q91XX5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgb5Q91XX5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.24■■□□□ 1.15
Pcdhgb5Q91XX5 Gm45444-201ENSMUST00000211394 898 ntBASIC22.24■■□□□ 1.15
Pcdhgb5Q91XX5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgb5Q91XX5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgb5Q91XX5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgb5Q91XX5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgb5Q91XX5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgb5Q91XX5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Pcdhgb5Q91XX5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
Pcdhgb5Q91XX5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms