Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.76■□□□□ 0.59
H1fooQ8VIK3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.76■□□□□ 0.59
H1fooQ8VIK3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H1fooQ8VIK3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
H1fooQ8VIK3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
H1fooQ8VIK3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H1fooQ8VIK3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
H1fooQ8VIK3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H1fooQ8VIK3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
H1fooQ8VIK3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H1fooQ8VIK3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
H1fooQ8VIK3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
H1fooQ8VIK3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H1fooQ8VIK3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H1fooQ8VIK3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
H1fooQ8VIK3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H1fooQ8VIK3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H1fooQ8VIK3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H1fooQ8VIK3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H1fooQ8VIK3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H1fooQ8VIK3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
H1fooQ8VIK3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H1fooQ8VIK3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
H1fooQ8VIK3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
H1fooQ8VIK3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
H1fooQ8VIK3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H1fooQ8VIK3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
H1fooQ8VIK3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
H1fooQ8VIK3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H1fooQ8VIK3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H1fooQ8VIK3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H1fooQ8VIK3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
H1fooQ8VIK3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
H1fooQ8VIK3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
H1fooQ8VIK3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H1fooQ8VIK3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
H1fooQ8VIK3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
H1fooQ8VIK3 Mir3960-201ENSMUST00000198213 73 ntBASIC18.7■□□□□ 0.58
H1fooQ8VIK3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
H1fooQ8VIK3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
H1fooQ8VIK3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
H1fooQ8VIK3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.69■□□□□ 0.58
H1fooQ8VIK3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
H1fooQ8VIK3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
H1fooQ8VIK3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
H1fooQ8VIK3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
H1fooQ8VIK3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
H1fooQ8VIK3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H1fooQ8VIK3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
H1fooQ8VIK3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
H1fooQ8VIK3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
H1fooQ8VIK3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.67■□□□□ 0.58
H1fooQ8VIK3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
H1fooQ8VIK3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H1fooQ8VIK3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
H1fooQ8VIK3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H1fooQ8VIK3 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.66■□□□□ 0.58
H1fooQ8VIK3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H1fooQ8VIK3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
H1fooQ8VIK3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H1fooQ8VIK3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
H1fooQ8VIK3 Gm9812-201ENSMUST00000061934 968 ntBASIC18.65■□□□□ 0.58
H1fooQ8VIK3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H1fooQ8VIK3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.65■□□□□ 0.58
H1fooQ8VIK3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H1fooQ8VIK3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
H1fooQ8VIK3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
H1fooQ8VIK3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.64■□□□□ 0.57
H1fooQ8VIK3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H1fooQ8VIK3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.63■□□□□ 0.57
H1fooQ8VIK3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
H1fooQ8VIK3 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.63■□□□□ 0.57
H1fooQ8VIK3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
H1fooQ8VIK3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H1fooQ8VIK3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H1fooQ8VIK3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
H1fooQ8VIK3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
H1fooQ8VIK3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
H1fooQ8VIK3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
H1fooQ8VIK3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
H1fooQ8VIK3 Gm45364-201ENSMUST00000210883 159 ntBASIC18.62■□□□□ 0.57
H1fooQ8VIK3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.62■□□□□ 0.57
H1fooQ8VIK3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
H1fooQ8VIK3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H1fooQ8VIK3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
H1fooQ8VIK3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H1fooQ8VIK3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.61■□□□□ 0.57
H1fooQ8VIK3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H1fooQ8VIK3 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.61■□□□□ 0.57
H1fooQ8VIK3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
H1fooQ8VIK3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
H1fooQ8VIK3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H1fooQ8VIK3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
H1fooQ8VIK3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.6■□□□□ 0.57
H1fooQ8VIK3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H1fooQ8VIK3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
H1fooQ8VIK3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.6■□□□□ 0.57
H1fooQ8VIK3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
H1fooQ8VIK3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H1fooQ8VIK3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms