Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retreg1dQ8VE91 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.13■■□□□ 1.13
Retreg1dQ8VE91 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Retreg1dQ8VE91 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Retreg1dQ8VE91 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.13■■□□□ 1.13
Retreg1dQ8VE91 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Retreg1dQ8VE91 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retreg1dQ8VE91 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retreg1dQ8VE91 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retreg1dQ8VE91 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Retreg1dQ8VE91 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Retreg1dQ8VE91 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retreg1dQ8VE91 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retreg1dQ8VE91 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retreg1dQ8VE91 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retreg1dQ8VE91 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.11■■□□□ 1.13
Retreg1dQ8VE91 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retreg1dQ8VE91 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retreg1dQ8VE91 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
Retreg1dQ8VE91 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retreg1dQ8VE91 Gm7332-201ENSMUST00000118351 454 ntBASIC22.1■■□□□ 1.13
Retreg1dQ8VE91 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.1■■□□□ 1.13
Retreg1dQ8VE91 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retreg1dQ8VE91 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Retreg1dQ8VE91 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retreg1dQ8VE91 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.09■■□□□ 1.13
Retreg1dQ8VE91 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.09■■□□□ 1.13
Retreg1dQ8VE91 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.09■■□□□ 1.13
Retreg1dQ8VE91 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.09■■□□□ 1.13
Retreg1dQ8VE91 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retreg1dQ8VE91 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.08■■□□□ 1.13
Retreg1dQ8VE91 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Retreg1dQ8VE91 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.08■■□□□ 1.13
Retreg1dQ8VE91 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Retreg1dQ8VE91 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Retreg1dQ8VE91 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Retreg1dQ8VE91 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retreg1dQ8VE91 Gm14523-201ENSMUST00000117260 558 ntBASIC22.07■■□□□ 1.12
Retreg1dQ8VE91 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.07■■□□□ 1.12
Retreg1dQ8VE91 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retreg1dQ8VE91 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Retreg1dQ8VE91 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retreg1dQ8VE91 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retreg1dQ8VE91 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retreg1dQ8VE91 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
Retreg1dQ8VE91 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retreg1dQ8VE91 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.06■■□□□ 1.12
Retreg1dQ8VE91 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retreg1dQ8VE91 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.05■■□□□ 1.12
Retreg1dQ8VE91 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.05■■□□□ 1.12
Retreg1dQ8VE91 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retreg1dQ8VE91 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retreg1dQ8VE91 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retreg1dQ8VE91 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retreg1dQ8VE91 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Retreg1dQ8VE91 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Retreg1dQ8VE91 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retreg1dQ8VE91 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retreg1dQ8VE91 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.01■■□□□ 1.11
Retreg1dQ8VE91 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retreg1dQ8VE91 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22■■□□□ 1.11
Retreg1dQ8VE91 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22■■□□□ 1.11
Retreg1dQ8VE91 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22■■□□□ 1.11
Retreg1dQ8VE91 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Retreg1dQ8VE91 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22■■□□□ 1.11
Retreg1dQ8VE91 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retreg1dQ8VE91 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Retreg1dQ8VE91 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.99■■□□□ 1.11
Retreg1dQ8VE91 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retreg1dQ8VE91 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Retreg1dQ8VE91 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retreg1dQ8VE91 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retreg1dQ8VE91 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.98■■□□□ 1.11
Retreg1dQ8VE91 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Retreg1dQ8VE91 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Retreg1dQ8VE91 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retreg1dQ8VE91 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.97■■□□□ 1.11
Retreg1dQ8VE91 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Retreg1dQ8VE91 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retreg1dQ8VE91 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Retreg1dQ8VE91 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.96■■□□□ 1.11
Retreg1dQ8VE91 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Retreg1dQ8VE91 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Retreg1dQ8VE91 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Retreg1dQ8VE91 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retreg1dQ8VE91 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Retreg1dQ8VE91 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.94■■□□□ 1.1
Retreg1dQ8VE91 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retreg1dQ8VE91 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retreg1dQ8VE91 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Retreg1dQ8VE91 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retreg1dQ8VE91 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retreg1dQ8VE91 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retreg1dQ8VE91 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retreg1dQ8VE91 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retreg1dQ8VE91 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retreg1dQ8VE91 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retreg1dQ8VE91 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Retreg1dQ8VE91 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retreg1dQ8VE91 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms