Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Upb1Q8VC97 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Upb1Q8VC97 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Upb1Q8VC97 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Upb1Q8VC97 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Upb1Q8VC97 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Upb1Q8VC97 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Upb1Q8VC97 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.63■■□□□ 1.53
Upb1Q8VC97 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Upb1Q8VC97 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Upb1Q8VC97 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Upb1Q8VC97 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Upb1Q8VC97 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Upb1Q8VC97 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.62■■□□□ 1.53
Upb1Q8VC97 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.62■■□□□ 1.53
Upb1Q8VC97 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.62■■□□□ 1.53
Upb1Q8VC97 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Upb1Q8VC97 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Upb1Q8VC97 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Upb1Q8VC97 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.61■■□□□ 1.53
Upb1Q8VC97 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Upb1Q8VC97 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Upb1Q8VC97 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.6■■□□□ 1.53
Upb1Q8VC97 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.6■■□□□ 1.53
Upb1Q8VC97 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Upb1Q8VC97 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.59■■□□□ 1.53
Upb1Q8VC97 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
Upb1Q8VC97 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Upb1Q8VC97 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.58■■□□□ 1.53
Upb1Q8VC97 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Upb1Q8VC97 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Upb1Q8VC97 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Upb1Q8VC97 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Upb1Q8VC97 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Upb1Q8VC97 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Upb1Q8VC97 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Upb1Q8VC97 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Upb1Q8VC97 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Upb1Q8VC97 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Upb1Q8VC97 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Upb1Q8VC97 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Upb1Q8VC97 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Upb1Q8VC97 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Upb1Q8VC97 Gm10420-201ENSMUST00000121713 882 ntBASIC24.54■■□□□ 1.52
Upb1Q8VC97 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Upb1Q8VC97 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Upb1Q8VC97 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Upb1Q8VC97 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Upb1Q8VC97 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Upb1Q8VC97 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Upb1Q8VC97 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Upb1Q8VC97 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Upb1Q8VC97 AC117769.4-201ENSMUST00000225679 685 ntBASIC24.52■■□□□ 1.52
Upb1Q8VC97 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Upb1Q8VC97 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.52■■□□□ 1.52
Upb1Q8VC97 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Upb1Q8VC97 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Upb1Q8VC97 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Upb1Q8VC97 Gm5067-201ENSMUST00000170449 1009 ntBASIC24.51■■□□□ 1.51
Upb1Q8VC97 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Upb1Q8VC97 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.5■■□□□ 1.51
Upb1Q8VC97 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC24.5■■□□□ 1.51
Upb1Q8VC97 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.49■■□□□ 1.51
Upb1Q8VC97 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Upb1Q8VC97 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Upb1Q8VC97 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Upb1Q8VC97 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.49■■□□□ 1.51
Upb1Q8VC97 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Upb1Q8VC97 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Upb1Q8VC97 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Upb1Q8VC97 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Upb1Q8VC97 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Upb1Q8VC97 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Upb1Q8VC97 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Upb1Q8VC97 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Upb1Q8VC97 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
Upb1Q8VC97 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC24.46■■□□□ 1.51
Upb1Q8VC97 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.45■■□□□ 1.51
Upb1Q8VC97 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Upb1Q8VC97 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Upb1Q8VC97 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.45■■□□□ 1.5
Upb1Q8VC97 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Upb1Q8VC97 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Upb1Q8VC97 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Upb1Q8VC97 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Upb1Q8VC97 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Upb1Q8VC97 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Upb1Q8VC97 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.43■■□□□ 1.5
Upb1Q8VC97 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Upb1Q8VC97 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Upb1Q8VC97 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.42■■□□□ 1.5
Upb1Q8VC97 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Upb1Q8VC97 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Upb1Q8VC97 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Upb1Q8VC97 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Upb1Q8VC97 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Upb1Q8VC97 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Upb1Q8VC97 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Upb1Q8VC97 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Upb1Q8VC97 Gm7199-201ENSMUST00000118327 1485 ntBASIC24.4■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms