Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
Tmc1Q8R4P5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.67■■■□□ 2.02
Tmc1Q8R4P5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Tmc1Q8R4P5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Tmc1Q8R4P5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Tmc1Q8R4P5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Tmc1Q8R4P5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Tmc1Q8R4P5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Tmc1Q8R4P5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
Tmc1Q8R4P5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Tmc1Q8R4P5 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Tmc1Q8R4P5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Tmc1Q8R4P5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
Tmc1Q8R4P5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
Tmc1Q8R4P5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Tmc1Q8R4P5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Tmc1Q8R4P5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Tmc1Q8R4P5 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
Tmc1Q8R4P5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Tmc1Q8R4P5 Gm6934-201ENSMUST00000194780 1905 ntBASIC27.63■■■□□ 2.01
Tmc1Q8R4P5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Tmc1Q8R4P5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC27.62■■■□□ 2.01
Tmc1Q8R4P5 Gm13042-201ENSMUST00000119244 1955 ntBASIC27.62■■■□□ 2.01
Tmc1Q8R4P5 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
Tmc1Q8R4P5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
Tmc1Q8R4P5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Tmc1Q8R4P5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Tmc1Q8R4P5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC27.62■■■□□ 2.01
Tmc1Q8R4P5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Tmc1Q8R4P5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Tmc1Q8R4P5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Tmc1Q8R4P5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Tmc1Q8R4P5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Tmc1Q8R4P5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Tmc1Q8R4P5 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Tmc1Q8R4P5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Tmc1Q8R4P5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Tmc1Q8R4P5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Tmc1Q8R4P5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.59■■■□□ 2.01
Tmc1Q8R4P5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
Tmc1Q8R4P5 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Tmc1Q8R4P5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
Tmc1Q8R4P5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
Tmc1Q8R4P5 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Tmc1Q8R4P5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2.01
Tmc1Q8R4P5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
Tmc1Q8R4P5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Tmc1Q8R4P5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Tmc1Q8R4P5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27.57■■■□□ 2
Tmc1Q8R4P5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.57■■■□□ 2
Tmc1Q8R4P5 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Tmc1Q8R4P5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC27.56■■■□□ 2
Tmc1Q8R4P5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Tmc1Q8R4P5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Tmc1Q8R4P5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Tmc1Q8R4P5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Tmc1Q8R4P5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27.54■■■□□ 2
Tmc1Q8R4P5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
Tmc1Q8R4P5 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
Tmc1Q8R4P5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
Tmc1Q8R4P5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC27.53■■■□□ 2
Tmc1Q8R4P5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
Tmc1Q8R4P5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
Tmc1Q8R4P5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
Tmc1Q8R4P5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
Tmc1Q8R4P5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Tmc1Q8R4P5 Dmtn-209ENSMUST00000228295 2572 ntBASIC27.52■■■□□ 2
Tmc1Q8R4P5 Gm7432-201ENSMUST00000210343 879 ntBASIC27.52■■■□□ 2
Tmc1Q8R4P5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Tmc1Q8R4P5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
Tmc1Q8R4P5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
Tmc1Q8R4P5 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Tmc1Q8R4P5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Tmc1Q8R4P5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Tmc1Q8R4P5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
Tmc1Q8R4P5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC27.48■■□□□ 1.99
Tmc1Q8R4P5 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Tmc1Q8R4P5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
Tmc1Q8R4P5 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
Tmc1Q8R4P5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Tmc1Q8R4P5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC27.47■■□□□ 1.99
Tmc1Q8R4P5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC27.47■■□□□ 1.99
Tmc1Q8R4P5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.46■■□□□ 1.99
Tmc1Q8R4P5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Tmc1Q8R4P5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.46■■□□□ 1.99
Tmc1Q8R4P5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Tmc1Q8R4P5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Tmc1Q8R4P5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.99
Tmc1Q8R4P5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.99
Tmc1Q8R4P5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.45■■□□□ 1.98
Tmc1Q8R4P5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.98
Tmc1Q8R4P5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.98
Tmc1Q8R4P5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Tmc1Q8R4P5 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Tmc1Q8R4P5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.44■■□□□ 1.98
Tmc1Q8R4P5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
Tmc1Q8R4P5 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
Tmc1Q8R4P5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
Tmc1Q8R4P5 Gm26766-202ENSMUST00000227544 2347 ntBASIC27.43■■□□□ 1.98
Tmc1Q8R4P5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.43■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms