Protein–RNA interactions for Protein: Q8K297

Colgalt1, Procollagen galactosyltransferase 1, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colgalt1Q8K297 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
Colgalt1Q8K297 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC24.37■■□□□ 1.49
Colgalt1Q8K297 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Colgalt1Q8K297 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Colgalt1Q8K297 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Colgalt1Q8K297 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Colgalt1Q8K297 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Colgalt1Q8K297 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Colgalt1Q8K297 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
Colgalt1Q8K297 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Colgalt1Q8K297 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Colgalt1Q8K297 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Colgalt1Q8K297 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Colgalt1Q8K297 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Colgalt1Q8K297 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Colgalt1Q8K297 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Colgalt1Q8K297 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Colgalt1Q8K297 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Colgalt1Q8K297 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.33■■□□□ 1.49
Colgalt1Q8K297 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Colgalt1Q8K297 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.33■■□□□ 1.49
Colgalt1Q8K297 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.32■■□□□ 1.48
Colgalt1Q8K297 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.32■■□□□ 1.48
Colgalt1Q8K297 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Colgalt1Q8K297 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Colgalt1Q8K297 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Colgalt1Q8K297 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Colgalt1Q8K297 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.31■■□□□ 1.48
Colgalt1Q8K297 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Colgalt1Q8K297 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Colgalt1Q8K297 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Colgalt1Q8K297 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Colgalt1Q8K297 Gm15039-201ENSMUST00000118914 875 ntBASIC24.3■■□□□ 1.48
Colgalt1Q8K297 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.3■■□□□ 1.48
Colgalt1Q8K297 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Colgalt1Q8K297 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Colgalt1Q8K297 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Colgalt1Q8K297 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Colgalt1Q8K297 Gm43592-201ENSMUST00000196922 1165 ntBASIC24.29■■□□□ 1.48
Colgalt1Q8K297 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Colgalt1Q8K297 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Colgalt1Q8K297 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Colgalt1Q8K297 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Colgalt1Q8K297 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Colgalt1Q8K297 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
Colgalt1Q8K297 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Colgalt1Q8K297 Gm13238-201ENSMUST00000117655 780 ntBASIC24.27■■□□□ 1.48
Colgalt1Q8K297 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.27■■□□□ 1.48
Colgalt1Q8K297 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Colgalt1Q8K297 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Colgalt1Q8K297 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Colgalt1Q8K297 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.26■■□□□ 1.47
Colgalt1Q8K297 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.26■■□□□ 1.47
Colgalt1Q8K297 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Colgalt1Q8K297 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Colgalt1Q8K297 Nsd1-203ENSMUST00000224156 1149 ntBASIC24.25■■□□□ 1.47
Colgalt1Q8K297 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.24■■□□□ 1.47
Colgalt1Q8K297 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC24.24■■□□□ 1.47
Colgalt1Q8K297 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Colgalt1Q8K297 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Colgalt1Q8K297 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Colgalt1Q8K297 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Colgalt1Q8K297 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.23■■□□□ 1.47
Colgalt1Q8K297 Gm43566-201ENSMUST00000196851 808 ntBASIC24.23■■□□□ 1.47
Colgalt1Q8K297 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24.23■■□□□ 1.47
Colgalt1Q8K297 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.23■■□□□ 1.47
Colgalt1Q8K297 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
Colgalt1Q8K297 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Colgalt1Q8K297 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.23■■□□□ 1.47
Colgalt1Q8K297 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Colgalt1Q8K297 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.22■■□□□ 1.47
Colgalt1Q8K297 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Colgalt1Q8K297 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Colgalt1Q8K297 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC24.22■■□□□ 1.47
Colgalt1Q8K297 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Colgalt1Q8K297 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Colgalt1Q8K297 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Colgalt1Q8K297 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC24.21■■□□□ 1.47
Colgalt1Q8K297 Gm15820-201ENSMUST00000201566 728 ntBASIC24.21■■□□□ 1.47
Colgalt1Q8K297 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Colgalt1Q8K297 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC24.2■■□□□ 1.46
Colgalt1Q8K297 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Colgalt1Q8K297 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.2■■□□□ 1.46
Colgalt1Q8K297 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Colgalt1Q8K297 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Colgalt1Q8K297 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Colgalt1Q8K297 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Colgalt1Q8K297 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Colgalt1Q8K297 AC117769.4-201ENSMUST00000225679 685 ntBASIC24.19■■□□□ 1.46
Colgalt1Q8K297 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Colgalt1Q8K297 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Colgalt1Q8K297 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Colgalt1Q8K297 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.18■■□□□ 1.46
Colgalt1Q8K297 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Colgalt1Q8K297 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Colgalt1Q8K297 Gm45444-201ENSMUST00000211394 898 ntBASIC24.17■■□□□ 1.46
Colgalt1Q8K297 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Colgalt1Q8K297 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.17■■□□□ 1.46
Colgalt1Q8K297 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Colgalt1Q8K297 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms