Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hist1h2aaQ8CGP4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Hist1h2aaQ8CGP4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hist1h2aaQ8CGP4 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.07■□□□□ 0.96
Hist1h2aaQ8CGP4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Hist1h2aaQ8CGP4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hist1h2aaQ8CGP4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.06■□□□□ 0.96
Hist1h2aaQ8CGP4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hist1h2aaQ8CGP4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hist1h2aaQ8CGP4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hist1h2aaQ8CGP4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hist1h2aaQ8CGP4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.05■□□□□ 0.96
Hist1h2aaQ8CGP4 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.05■□□□□ 0.96
Hist1h2aaQ8CGP4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.05■□□□□ 0.96
Hist1h2aaQ8CGP4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.04■□□□□ 0.96
Hist1h2aaQ8CGP4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hist1h2aaQ8CGP4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hist1h2aaQ8CGP4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hist1h2aaQ8CGP4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.04■□□□□ 0.96
Hist1h2aaQ8CGP4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Hist1h2aaQ8CGP4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hist1h2aaQ8CGP4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hist1h2aaQ8CGP4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.03■□□□□ 0.96
Hist1h2aaQ8CGP4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hist1h2aaQ8CGP4 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.02■□□□□ 0.96
Hist1h2aaQ8CGP4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hist1h2aaQ8CGP4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.02■□□□□ 0.96
Hist1h2aaQ8CGP4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hist1h2aaQ8CGP4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hist1h2aaQ8CGP4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hist1h2aaQ8CGP4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hist1h2aaQ8CGP4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.01■□□□□ 0.95
Hist1h2aaQ8CGP4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hist1h2aaQ8CGP4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hist1h2aaQ8CGP4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hist1h2aaQ8CGP4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hist1h2aaQ8CGP4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Hist1h2aaQ8CGP4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hist1h2aaQ8CGP4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hist1h2aaQ8CGP4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hist1h2aaQ8CGP4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Hist1h2aaQ8CGP4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hist1h2aaQ8CGP4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Hist1h2aaQ8CGP4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hist1h2aaQ8CGP4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.98■□□□□ 0.95
Hist1h2aaQ8CGP4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Hist1h2aaQ8CGP4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.98■□□□□ 0.95
Hist1h2aaQ8CGP4 Terc-201ENSMUST00000082862 423 ntBASIC20.98■□□□□ 0.95
Hist1h2aaQ8CGP4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hist1h2aaQ8CGP4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Hist1h2aaQ8CGP4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.98■□□□□ 0.95
Hist1h2aaQ8CGP4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hist1h2aaQ8CGP4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
Hist1h2aaQ8CGP4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Hist1h2aaQ8CGP4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hist1h2aaQ8CGP4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hist1h2aaQ8CGP4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hist1h2aaQ8CGP4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hist1h2aaQ8CGP4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hist1h2aaQ8CGP4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hist1h2aaQ8CGP4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hist1h2aaQ8CGP4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hist1h2aaQ8CGP4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hist1h2aaQ8CGP4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hist1h2aaQ8CGP4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hist1h2aaQ8CGP4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hist1h2aaQ8CGP4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hist1h2aaQ8CGP4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hist1h2aaQ8CGP4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Hist1h2aaQ8CGP4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hist1h2aaQ8CGP4 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.94■□□□□ 0.94
Hist1h2aaQ8CGP4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hist1h2aaQ8CGP4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hist1h2aaQ8CGP4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Hist1h2aaQ8CGP4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hist1h2aaQ8CGP4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hist1h2aaQ8CGP4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hist1h2aaQ8CGP4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hist1h2aaQ8CGP4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hist1h2aaQ8CGP4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
Hist1h2aaQ8CGP4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
Hist1h2aaQ8CGP4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hist1h2aaQ8CGP4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Hist1h2aaQ8CGP4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hist1h2aaQ8CGP4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.92■□□□□ 0.94
Hist1h2aaQ8CGP4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hist1h2aaQ8CGP4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hist1h2aaQ8CGP4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hist1h2aaQ8CGP4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Hist1h2aaQ8CGP4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.91■□□□□ 0.94
Hist1h2aaQ8CGP4 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.91■□□□□ 0.94
Hist1h2aaQ8CGP4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hist1h2aaQ8CGP4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hist1h2aaQ8CGP4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hist1h2aaQ8CGP4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Hist1h2aaQ8CGP4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Hist1h2aaQ8CGP4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.9■□□□□ 0.94
Hist1h2aaQ8CGP4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hist1h2aaQ8CGP4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.9■□□□□ 0.94
Hist1h2aaQ8CGP4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms