Protein–RNA interactions for Protein: Q8C8M1

Sinhcaf, SIN3-HDAC complex-associated factor, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SinhcafQ8C8M1 Gm44428-201ENSMUST00000204474 874 ntBASIC21.66■■□□□ 1.06
SinhcafQ8C8M1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SinhcafQ8C8M1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
SinhcafQ8C8M1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SinhcafQ8C8M1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SinhcafQ8C8M1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SinhcafQ8C8M1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SinhcafQ8C8M1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.65■■□□□ 1.06
SinhcafQ8C8M1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SinhcafQ8C8M1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SinhcafQ8C8M1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SinhcafQ8C8M1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.64■■□□□ 1.05
SinhcafQ8C8M1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SinhcafQ8C8M1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SinhcafQ8C8M1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SinhcafQ8C8M1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SinhcafQ8C8M1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.62■■□□□ 1.05
SinhcafQ8C8M1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SinhcafQ8C8M1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.61■■□□□ 1.05
SinhcafQ8C8M1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.61■■□□□ 1.05
SinhcafQ8C8M1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.61■■□□□ 1.05
SinhcafQ8C8M1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
SinhcafQ8C8M1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SinhcafQ8C8M1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
SinhcafQ8C8M1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SinhcafQ8C8M1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SinhcafQ8C8M1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SinhcafQ8C8M1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.59■■□□□ 1.05
SinhcafQ8C8M1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SinhcafQ8C8M1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SinhcafQ8C8M1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SinhcafQ8C8M1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SinhcafQ8C8M1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SinhcafQ8C8M1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SinhcafQ8C8M1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SinhcafQ8C8M1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SinhcafQ8C8M1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SinhcafQ8C8M1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SinhcafQ8C8M1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.57■■□□□ 1.04
SinhcafQ8C8M1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.56■■□□□ 1.04
SinhcafQ8C8M1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.56■■□□□ 1.04
SinhcafQ8C8M1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SinhcafQ8C8M1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SinhcafQ8C8M1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SinhcafQ8C8M1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.55■■□□□ 1.04
SinhcafQ8C8M1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SinhcafQ8C8M1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SinhcafQ8C8M1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SinhcafQ8C8M1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SinhcafQ8C8M1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SinhcafQ8C8M1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SinhcafQ8C8M1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.53■■□□□ 1.04
SinhcafQ8C8M1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SinhcafQ8C8M1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
SinhcafQ8C8M1 Gm10420-201ENSMUST00000121713 882 ntBASIC21.51■■□□□ 1.03
SinhcafQ8C8M1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SinhcafQ8C8M1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SinhcafQ8C8M1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SinhcafQ8C8M1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SinhcafQ8C8M1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SinhcafQ8C8M1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SinhcafQ8C8M1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SinhcafQ8C8M1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.49■■□□□ 1.03
SinhcafQ8C8M1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SinhcafQ8C8M1 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.49■■□□□ 1.03
SinhcafQ8C8M1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SinhcafQ8C8M1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SinhcafQ8C8M1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
SinhcafQ8C8M1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.49■■□□□ 1.03
SinhcafQ8C8M1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SinhcafQ8C8M1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SinhcafQ8C8M1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SinhcafQ8C8M1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SinhcafQ8C8M1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.48■■□□□ 1.03
SinhcafQ8C8M1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SinhcafQ8C8M1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SinhcafQ8C8M1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SinhcafQ8C8M1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SinhcafQ8C8M1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SinhcafQ8C8M1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SinhcafQ8C8M1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SinhcafQ8C8M1 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.46■■□□□ 1.03
SinhcafQ8C8M1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SinhcafQ8C8M1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SinhcafQ8C8M1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SinhcafQ8C8M1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
SinhcafQ8C8M1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SinhcafQ8C8M1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.45■■□□□ 1.02
SinhcafQ8C8M1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SinhcafQ8C8M1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SinhcafQ8C8M1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SinhcafQ8C8M1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SinhcafQ8C8M1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SinhcafQ8C8M1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SinhcafQ8C8M1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SinhcafQ8C8M1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SinhcafQ8C8M1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SinhcafQ8C8M1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SinhcafQ8C8M1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.42■■□□□ 1.02
SinhcafQ8C8M1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms