Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpne3Q8BT60 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Cpne3Q8BT60 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.59■■□□□ 1.05
Cpne3Q8BT60 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpne3Q8BT60 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpne3Q8BT60 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpne3Q8BT60 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpne3Q8BT60 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cpne3Q8BT60 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cpne3Q8BT60 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cpne3Q8BT60 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cpne3Q8BT60 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cpne3Q8BT60 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cpne3Q8BT60 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cpne3Q8BT60 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cpne3Q8BT60 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cpne3Q8BT60 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpne3Q8BT60 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpne3Q8BT60 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpne3Q8BT60 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpne3Q8BT60 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpne3Q8BT60 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpne3Q8BT60 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.55■■□□□ 1.04
Cpne3Q8BT60 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cpne3Q8BT60 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cpne3Q8BT60 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.54■■□□□ 1.04
Cpne3Q8BT60 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cpne3Q8BT60 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Cpne3Q8BT60 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpne3Q8BT60 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.53■■□□□ 1.04
Cpne3Q8BT60 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpne3Q8BT60 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Cpne3Q8BT60 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpne3Q8BT60 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.52■■□□□ 1.04
Cpne3Q8BT60 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Cpne3Q8BT60 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Cpne3Q8BT60 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cpne3Q8BT60 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cpne3Q8BT60 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cpne3Q8BT60 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Cpne3Q8BT60 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cpne3Q8BT60 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cpne3Q8BT60 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cpne3Q8BT60 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cpne3Q8BT60 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cpne3Q8BT60 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cpne3Q8BT60 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Cpne3Q8BT60 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cpne3Q8BT60 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cpne3Q8BT60 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cpne3Q8BT60 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cpne3Q8BT60 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cpne3Q8BT60 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.48■■□□□ 1.03
Cpne3Q8BT60 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cpne3Q8BT60 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cpne3Q8BT60 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cpne3Q8BT60 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cpne3Q8BT60 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cpne3Q8BT60 Gm4799-201ENSMUST00000095396 657 ntBASIC21.47■■□□□ 1.03
Cpne3Q8BT60 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cpne3Q8BT60 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
Cpne3Q8BT60 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Cpne3Q8BT60 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Cpne3Q8BT60 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Cpne3Q8BT60 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cpne3Q8BT60 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cpne3Q8BT60 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Cpne3Q8BT60 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cpne3Q8BT60 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cpne3Q8BT60 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cpne3Q8BT60 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.44■■□□□ 1.02
Cpne3Q8BT60 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.44■■□□□ 1.02
Cpne3Q8BT60 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cpne3Q8BT60 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cpne3Q8BT60 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cpne3Q8BT60 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpne3Q8BT60 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.43■■□□□ 1.02
Cpne3Q8BT60 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.43■■□□□ 1.02
Cpne3Q8BT60 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Cpne3Q8BT60 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpne3Q8BT60 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cpne3Q8BT60 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Cpne3Q8BT60 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cpne3Q8BT60 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.41■■□□□ 1.02
Cpne3Q8BT60 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cpne3Q8BT60 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cpne3Q8BT60 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cpne3Q8BT60 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cpne3Q8BT60 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cpne3Q8BT60 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.4■■□□□ 1.02
Cpne3Q8BT60 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cpne3Q8BT60 Gm7432-201ENSMUST00000210343 879 ntBASIC21.4■■□□□ 1.02
Cpne3Q8BT60 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.4■■□□□ 1.02
Cpne3Q8BT60 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cpne3Q8BT60 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cpne3Q8BT60 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.39■■□□□ 1.02
Cpne3Q8BT60 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cpne3Q8BT60 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cpne3Q8BT60 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.39■■□□□ 1.01
Cpne3Q8BT60 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms