Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ckap4Q8BMK4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ckap4Q8BMK4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ckap4Q8BMK4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ckap4Q8BMK4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ckap4Q8BMK4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ckap4Q8BMK4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ckap4Q8BMK4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ckap4Q8BMK4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ckap4Q8BMK4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ckap4Q8BMK4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.14■□□□□ 0.98
Ckap4Q8BMK4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ckap4Q8BMK4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ckap4Q8BMK4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ckap4Q8BMK4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ckap4Q8BMK4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ckap4Q8BMK4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ckap4Q8BMK4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ckap4Q8BMK4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ckap4Q8BMK4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ckap4Q8BMK4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ckap4Q8BMK4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Ckap4Q8BMK4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ckap4Q8BMK4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ckap4Q8BMK4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ckap4Q8BMK4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ckap4Q8BMK4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.11■□□□□ 0.97
Ckap4Q8BMK4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.11■□□□□ 0.97
Ckap4Q8BMK4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Ckap4Q8BMK4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ckap4Q8BMK4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ckap4Q8BMK4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ckap4Q8BMK4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Ckap4Q8BMK4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ckap4Q8BMK4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ckap4Q8BMK4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.08■□□□□ 0.97
Ckap4Q8BMK4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.08■□□□□ 0.97
Ckap4Q8BMK4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ckap4Q8BMK4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ckap4Q8BMK4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Ckap4Q8BMK4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ckap4Q8BMK4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ckap4Q8BMK4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ckap4Q8BMK4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ckap4Q8BMK4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ckap4Q8BMK4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ckap4Q8BMK4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ckap4Q8BMK4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ckap4Q8BMK4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ckap4Q8BMK4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ckap4Q8BMK4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ckap4Q8BMK4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ckap4Q8BMK4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ckap4Q8BMK4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ckap4Q8BMK4 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.05■□□□□ 0.96
Ckap4Q8BMK4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ckap4Q8BMK4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ckap4Q8BMK4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ckap4Q8BMK4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ckap4Q8BMK4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ckap4Q8BMK4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.04■□□□□ 0.96
Ckap4Q8BMK4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
Ckap4Q8BMK4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ckap4Q8BMK4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Ckap4Q8BMK4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ckap4Q8BMK4 Gm7432-201ENSMUST00000210343 879 ntBASIC21.03■□□□□ 0.96
Ckap4Q8BMK4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ckap4Q8BMK4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ckap4Q8BMK4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ckap4Q8BMK4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ckap4Q8BMK4 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.02■□□□□ 0.96
Ckap4Q8BMK4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ckap4Q8BMK4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ckap4Q8BMK4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ckap4Q8BMK4 Gm37136-201ENSMUST00000194368 194 ntBASIC21.02■□□□□ 0.96
Ckap4Q8BMK4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ckap4Q8BMK4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ckap4Q8BMK4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ckap4Q8BMK4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ckap4Q8BMK4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ckap4Q8BMK4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ckap4Q8BMK4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.01■□□□□ 0.95
Ckap4Q8BMK4 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.01■□□□□ 0.95
Ckap4Q8BMK4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ckap4Q8BMK4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ckap4Q8BMK4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Ckap4Q8BMK4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ckap4Q8BMK4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ckap4Q8BMK4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ckap4Q8BMK4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.99■□□□□ 0.95
Ckap4Q8BMK4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ckap4Q8BMK4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Ckap4Q8BMK4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ckap4Q8BMK4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ckap4Q8BMK4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ckap4Q8BMK4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ckap4Q8BMK4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ckap4Q8BMK4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ckap4Q8BMK4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ckap4Q8BMK4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms