Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cdkl3Q8BLF2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl3Q8BLF2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkl3Q8BLF2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkl3Q8BLF2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.39■□□□□ 0.69
Cdkl3Q8BLF2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Cdkl3Q8BLF2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkl3Q8BLF2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.39■□□□□ 0.69
Cdkl3Q8BLF2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cdkl3Q8BLF2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkl3Q8BLF2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkl3Q8BLF2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.38■□□□□ 0.69
Cdkl3Q8BLF2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkl3Q8BLF2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.38■□□□□ 0.69
Cdkl3Q8BLF2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkl3Q8BLF2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkl3Q8BLF2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkl3Q8BLF2 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.37■□□□□ 0.69
Cdkl3Q8BLF2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cdkl3Q8BLF2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkl3Q8BLF2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkl3Q8BLF2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkl3Q8BLF2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkl3Q8BLF2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkl3Q8BLF2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdkl3Q8BLF2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cdkl3Q8BLF2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdkl3Q8BLF2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cdkl3Q8BLF2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdkl3Q8BLF2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cdkl3Q8BLF2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdkl3Q8BLF2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdkl3Q8BLF2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdkl3Q8BLF2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdkl3Q8BLF2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdkl3Q8BLF2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cdkl3Q8BLF2 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.33■□□□□ 0.69
Cdkl3Q8BLF2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdkl3Q8BLF2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cdkl3Q8BLF2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdkl3Q8BLF2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.33■□□□□ 0.69
Cdkl3Q8BLF2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdkl3Q8BLF2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdkl3Q8BLF2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.33■□□□□ 0.68
Cdkl3Q8BLF2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cdkl3Q8BLF2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdkl3Q8BLF2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cdkl3Q8BLF2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdkl3Q8BLF2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdkl3Q8BLF2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdkl3Q8BLF2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdkl3Q8BLF2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.32■□□□□ 0.68
Cdkl3Q8BLF2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdkl3Q8BLF2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdkl3Q8BLF2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdkl3Q8BLF2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdkl3Q8BLF2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkl3Q8BLF2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkl3Q8BLF2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkl3Q8BLF2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cdkl3Q8BLF2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkl3Q8BLF2 Notumos-201ENSMUST00000151998 2659 ntBASIC19.3■□□□□ 0.68
Cdkl3Q8BLF2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkl3Q8BLF2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkl3Q8BLF2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkl3Q8BLF2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkl3Q8BLF2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkl3Q8BLF2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkl3Q8BLF2 Gm16148-201ENSMUST00000119653 893 ntBASIC19.29■□□□□ 0.68
Cdkl3Q8BLF2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkl3Q8BLF2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkl3Q8BLF2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkl3Q8BLF2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkl3Q8BLF2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl3Q8BLF2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl3Q8BLF2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl3Q8BLF2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl3Q8BLF2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl3Q8BLF2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl3Q8BLF2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdkl3Q8BLF2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.27■□□□□ 0.68
Cdkl3Q8BLF2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
Cdkl3Q8BLF2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Cdkl3Q8BLF2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cdkl3Q8BLF2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkl3Q8BLF2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkl3Q8BLF2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkl3Q8BLF2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkl3Q8BLF2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkl3Q8BLF2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.26■□□□□ 0.67
Cdkl3Q8BLF2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkl3Q8BLF2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkl3Q8BLF2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkl3Q8BLF2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkl3Q8BLF2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.25■□□□□ 0.67
Cdkl3Q8BLF2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkl3Q8BLF2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkl3Q8BLF2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cdkl3Q8BLF2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdkl3Q8BLF2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms