Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim50Q810I2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim50Q810I2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim50Q810I2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.85■■□□□ 1.09
Trim50Q810I2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim50Q810I2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim50Q810I2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim50Q810I2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim50Q810I2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Trim50Q810I2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim50Q810I2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.83■■□□□ 1.09
Trim50Q810I2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim50Q810I2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim50Q810I2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim50Q810I2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim50Q810I2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim50Q810I2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim50Q810I2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trim50Q810I2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trim50Q810I2 Terc-201ENSMUST00000082862 423 ntBASIC21.82■■□□□ 1.08
Trim50Q810I2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trim50Q810I2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Trim50Q810I2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim50Q810I2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trim50Q810I2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trim50Q810I2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.8■■□□□ 1.08
Trim50Q810I2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim50Q810I2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim50Q810I2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trim50Q810I2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trim50Q810I2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim50Q810I2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Trim50Q810I2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim50Q810I2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Trim50Q810I2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trim50Q810I2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.79■■□□□ 1.08
Trim50Q810I2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trim50Q810I2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim50Q810I2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim50Q810I2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim50Q810I2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim50Q810I2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim50Q810I2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim50Q810I2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim50Q810I2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim50Q810I2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim50Q810I2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim50Q810I2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim50Q810I2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim50Q810I2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.77■■□□□ 1.08
Trim50Q810I2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Trim50Q810I2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim50Q810I2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.77■■□□□ 1.08
Trim50Q810I2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Trim50Q810I2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim50Q810I2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Trim50Q810I2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim50Q810I2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Trim50Q810I2 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.75■■□□□ 1.07
Trim50Q810I2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim50Q810I2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim50Q810I2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim50Q810I2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Trim50Q810I2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.75■■□□□ 1.07
Trim50Q810I2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim50Q810I2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim50Q810I2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim50Q810I2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim50Q810I2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Trim50Q810I2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim50Q810I2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim50Q810I2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim50Q810I2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim50Q810I2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim50Q810I2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim50Q810I2 Scarna2-201ENSMUST00000157560 414 ntBASIC21.73■■□□□ 1.07
Trim50Q810I2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim50Q810I2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim50Q810I2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim50Q810I2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Trim50Q810I2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim50Q810I2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.72■■□□□ 1.07
Trim50Q810I2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim50Q810I2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim50Q810I2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.72■■□□□ 1.07
Trim50Q810I2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Trim50Q810I2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.71■■□□□ 1.07
Trim50Q810I2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Trim50Q810I2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim50Q810I2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim50Q810I2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim50Q810I2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Trim50Q810I2 Gm9806-201ENSMUST00000051080 552 ntBASIC21.7■■□□□ 1.06
Trim50Q810I2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trim50Q810I2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim50Q810I2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.69■■□□□ 1.06
Trim50Q810I2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim50Q810I2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim50Q810I2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim50Q810I2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms