Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sh3tc2Q80VA5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Sh3tc2Q80VA5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.58■■□□□ 1.53
Sh3tc2Q80VA5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.58■■□□□ 1.53
Sh3tc2Q80VA5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Sh3tc2Q80VA5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Sh3tc2Q80VA5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Sh3tc2Q80VA5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Sh3tc2Q80VA5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC24.57■■□□□ 1.52
Sh3tc2Q80VA5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Sh3tc2Q80VA5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Sh3tc2Q80VA5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.56■■□□□ 1.52
Sh3tc2Q80VA5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Sh3tc2Q80VA5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Sh3tc2Q80VA5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.55■■□□□ 1.52
Sh3tc2Q80VA5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Sh3tc2Q80VA5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Sh3tc2Q80VA5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Sh3tc2Q80VA5 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Sh3tc2Q80VA5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Sh3tc2Q80VA5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Sh3tc2Q80VA5 Gm15820-201ENSMUST00000201566 728 ntBASIC24.54■■□□□ 1.52
Sh3tc2Q80VA5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.53■■□□□ 1.52
Sh3tc2Q80VA5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.53■■□□□ 1.52
Sh3tc2Q80VA5 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.53■■□□□ 1.52
Sh3tc2Q80VA5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Sh3tc2Q80VA5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Sh3tc2Q80VA5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Sh3tc2Q80VA5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
Sh3tc2Q80VA5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Sh3tc2Q80VA5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Sh3tc2Q80VA5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Sh3tc2Q80VA5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Sh3tc2Q80VA5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Sh3tc2Q80VA5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.5■■□□□ 1.51
Sh3tc2Q80VA5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.5■■□□□ 1.51
Sh3tc2Q80VA5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sh3tc2Q80VA5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sh3tc2Q80VA5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Sh3tc2Q80VA5 Gm44428-201ENSMUST00000204474 874 ntBASIC24.5■■□□□ 1.51
Sh3tc2Q80VA5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.5■■□□□ 1.51
Sh3tc2Q80VA5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.5■■□□□ 1.51
Sh3tc2Q80VA5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sh3tc2Q80VA5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Sh3tc2Q80VA5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.49■■□□□ 1.51
Sh3tc2Q80VA5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Sh3tc2Q80VA5 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sh3tc2Q80VA5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Sh3tc2Q80VA5 Gm13238-201ENSMUST00000117655 780 ntBASIC24.48■■□□□ 1.51
Sh3tc2Q80VA5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Sh3tc2Q80VA5 Rps24-207ENSMUST00000224568 714 ntBASIC24.48■■□□□ 1.51
Sh3tc2Q80VA5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Sh3tc2Q80VA5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Sh3tc2Q80VA5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Sh3tc2Q80VA5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Sh3tc2Q80VA5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Sh3tc2Q80VA5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Sh3tc2Q80VA5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Sh3tc2Q80VA5 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.46■■□□□ 1.51
Sh3tc2Q80VA5 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.46■■□□□ 1.51
Sh3tc2Q80VA5 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Sh3tc2Q80VA5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Sh3tc2Q80VA5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Sh3tc2Q80VA5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
Sh3tc2Q80VA5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Sh3tc2Q80VA5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Sh3tc2Q80VA5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Sh3tc2Q80VA5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC24.43■■□□□ 1.5
Sh3tc2Q80VA5 Nsd1-203ENSMUST00000224156 1149 ntBASIC24.43■■□□□ 1.5
Sh3tc2Q80VA5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Sh3tc2Q80VA5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Sh3tc2Q80VA5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.42■■□□□ 1.5
Sh3tc2Q80VA5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sh3tc2Q80VA5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sh3tc2Q80VA5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC24.41■■□□□ 1.5
Sh3tc2Q80VA5 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Sh3tc2Q80VA5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Sh3tc2Q80VA5 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Sh3tc2Q80VA5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Sh3tc2Q80VA5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sh3tc2Q80VA5 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Sh3tc2Q80VA5 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC24.4■■□□□ 1.5
Sh3tc2Q80VA5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Sh3tc2Q80VA5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC24.39■■□□□ 1.49
Sh3tc2Q80VA5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Sh3tc2Q80VA5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Sh3tc2Q80VA5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Sh3tc2Q80VA5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sh3tc2Q80VA5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sh3tc2Q80VA5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sh3tc2Q80VA5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
Sh3tc2Q80VA5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sh3tc2Q80VA5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC24.38■■□□□ 1.49
Sh3tc2Q80VA5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sh3tc2Q80VA5 Gm43566-201ENSMUST00000196851 808 ntBASIC24.38■■□□□ 1.49
Sh3tc2Q80VA5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sh3tc2Q80VA5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sh3tc2Q80VA5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
Sh3tc2Q80VA5 Gm43592-201ENSMUST00000196922 1165 ntBASIC24.37■■□□□ 1.49
Sh3tc2Q80VA5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 219.2 ms