Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ubr5Q80TP3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.35■□□□□ 0.85
Ubr5Q80TP3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Ubr5Q80TP3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr5Q80TP3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Ubr5Q80TP3 Etf1-202ENSMUST00000180351 108 ntBASIC20.34■□□□□ 0.85
Ubr5Q80TP3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Ubr5Q80TP3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.34■□□□□ 0.85
Ubr5Q80TP3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr5Q80TP3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr5Q80TP3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ubr5Q80TP3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ubr5Q80TP3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ubr5Q80TP3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ubr5Q80TP3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ubr5Q80TP3 Gm21956-201ENSMUST00000179946 522 ntBASIC20.32■□□□□ 0.84
Ubr5Q80TP3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.32■□□□□ 0.84
Ubr5Q80TP3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ubr5Q80TP3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ubr5Q80TP3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Ubr5Q80TP3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.32■□□□□ 0.84
Ubr5Q80TP3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.31■□□□□ 0.84
Ubr5Q80TP3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ubr5Q80TP3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.31■□□□□ 0.84
Ubr5Q80TP3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ubr5Q80TP3 Gm10232-201ENSMUST00000089221 720 ntBASIC20.3■□□□□ 0.84
Ubr5Q80TP3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr5Q80TP3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.3■□□□□ 0.84
Ubr5Q80TP3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr5Q80TP3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr5Q80TP3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr5Q80TP3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr5Q80TP3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr5Q80TP3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.29■□□□□ 0.84
Ubr5Q80TP3 Gm13241-201ENSMUST00000094493 780 ntBASIC20.28■□□□□ 0.84
Ubr5Q80TP3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ubr5Q80TP3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubr5Q80TP3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ubr5Q80TP3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubr5Q80TP3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ubr5Q80TP3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.26■□□□□ 0.83
Ubr5Q80TP3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr5Q80TP3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.26■□□□□ 0.83
Ubr5Q80TP3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr5Q80TP3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr5Q80TP3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ubr5Q80TP3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr5Q80TP3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr5Q80TP3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ubr5Q80TP3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr5Q80TP3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr5Q80TP3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.23■□□□□ 0.83
Ubr5Q80TP3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr5Q80TP3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr5Q80TP3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr5Q80TP3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr5Q80TP3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr5Q80TP3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.21■□□□□ 0.83
Ubr5Q80TP3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ubr5Q80TP3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.2■□□□□ 0.82
Ubr5Q80TP3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.2■□□□□ 0.82
Ubr5Q80TP3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ubr5Q80TP3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ubr5Q80TP3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.2■□□□□ 0.82
Ubr5Q80TP3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ubr5Q80TP3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr5Q80TP3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ubr5Q80TP3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr5Q80TP3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr5Q80TP3 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.19■□□□□ 0.82
Ubr5Q80TP3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.18■□□□□ 0.82
Ubr5Q80TP3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr5Q80TP3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr5Q80TP3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Ubr5Q80TP3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.18■□□□□ 0.82
Ubr5Q80TP3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr5Q80TP3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ubr5Q80TP3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr5Q80TP3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr5Q80TP3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr5Q80TP3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr5Q80TP3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr5Q80TP3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr5Q80TP3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr5Q80TP3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ubr5Q80TP3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr5Q80TP3 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.16■□□□□ 0.82
Ubr5Q80TP3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr5Q80TP3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr5Q80TP3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr5Q80TP3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Ubr5Q80TP3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr5Q80TP3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr5Q80TP3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Ubr5Q80TP3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ubr5Q80TP3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ubr5Q80TP3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ubr5Q80TP3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ubr5Q80TP3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ubr5Q80TP3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms