Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Otub1Q7TQI3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.26■□□□□ 0.99
Otub1Q7TQI3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Otub1Q7TQI3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.26■□□□□ 0.99
Otub1Q7TQI3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Otub1Q7TQI3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Otub1Q7TQI3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Otub1Q7TQI3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Otub1Q7TQI3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Otub1Q7TQI3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Otub1Q7TQI3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Otub1Q7TQI3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Otub1Q7TQI3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Otub1Q7TQI3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Otub1Q7TQI3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Otub1Q7TQI3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Otub1Q7TQI3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Otub1Q7TQI3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Otub1Q7TQI3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Otub1Q7TQI3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.22■□□□□ 0.99
Otub1Q7TQI3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Otub1Q7TQI3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Otub1Q7TQI3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Otub1Q7TQI3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Otub1Q7TQI3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Otub1Q7TQI3 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.21■□□□□ 0.99
Otub1Q7TQI3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.2■□□□□ 0.98
Otub1Q7TQI3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Otub1Q7TQI3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Otub1Q7TQI3 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.2■□□□□ 0.98
Otub1Q7TQI3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Otub1Q7TQI3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Otub1Q7TQI3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Otub1Q7TQI3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.19■□□□□ 0.98
Otub1Q7TQI3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Otub1Q7TQI3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Otub1Q7TQI3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Otub1Q7TQI3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Otub1Q7TQI3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Otub1Q7TQI3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Otub1Q7TQI3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Otub1Q7TQI3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.18■□□□□ 0.98
Otub1Q7TQI3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Otub1Q7TQI3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Otub1Q7TQI3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Otub1Q7TQI3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
Otub1Q7TQI3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Otub1Q7TQI3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Otub1Q7TQI3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Otub1Q7TQI3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Otub1Q7TQI3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Otub1Q7TQI3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Otub1Q7TQI3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Otub1Q7TQI3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Otub1Q7TQI3 Gm7432-201ENSMUST00000210343 879 ntBASIC21.16■□□□□ 0.98
Otub1Q7TQI3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Otub1Q7TQI3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Otub1Q7TQI3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Otub1Q7TQI3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Otub1Q7TQI3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Otub1Q7TQI3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Otub1Q7TQI3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.14■□□□□ 0.97
Otub1Q7TQI3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Otub1Q7TQI3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Otub1Q7TQI3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Otub1Q7TQI3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Otub1Q7TQI3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Otub1Q7TQI3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Otub1Q7TQI3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Otub1Q7TQI3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Otub1Q7TQI3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Otub1Q7TQI3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Otub1Q7TQI3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Otub1Q7TQI3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Otub1Q7TQI3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Otub1Q7TQI3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Otub1Q7TQI3 Gm11599-201ENSMUST00000118720 878 ntBASIC21.11■□□□□ 0.97
Otub1Q7TQI3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Otub1Q7TQI3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Otub1Q7TQI3 Gm4799-201ENSMUST00000095396 657 ntBASIC21.11■□□□□ 0.97
Otub1Q7TQI3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Otub1Q7TQI3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Otub1Q7TQI3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Otub1Q7TQI3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Otub1Q7TQI3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Otub1Q7TQI3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Otub1Q7TQI3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Otub1Q7TQI3 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.09■□□□□ 0.97
Otub1Q7TQI3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Otub1Q7TQI3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Otub1Q7TQI3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Otub1Q7TQI3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Otub1Q7TQI3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Otub1Q7TQI3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Otub1Q7TQI3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Otub1Q7TQI3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
Otub1Q7TQI3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Otub1Q7TQI3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Otub1Q7TQI3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Otub1Q7TQI3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms