Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcd3Q6P9Z1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.5■□□□□ 0.87
Smarcd3Q6P9Z1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcd3Q6P9Z1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.5■□□□□ 0.87
Smarcd3Q6P9Z1 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.5■□□□□ 0.87
Smarcd3Q6P9Z1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcd3Q6P9Z1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcd3Q6P9Z1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcd3Q6P9Z1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcd3Q6P9Z1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.5■□□□□ 0.87
Smarcd3Q6P9Z1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.49■□□□□ 0.87
Smarcd3Q6P9Z1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcd3Q6P9Z1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Smarcd3Q6P9Z1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Smarcd3Q6P9Z1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcd3Q6P9Z1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Smarcd3Q6P9Z1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Smarcd3Q6P9Z1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcd3Q6P9Z1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcd3Q6P9Z1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Smarcd3Q6P9Z1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcd3Q6P9Z1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcd3Q6P9Z1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcd3Q6P9Z1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcd3Q6P9Z1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcd3Q6P9Z1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcd3Q6P9Z1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcd3Q6P9Z1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcd3Q6P9Z1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcd3Q6P9Z1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcd3Q6P9Z1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.46■□□□□ 0.87
Smarcd3Q6P9Z1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Smarcd3Q6P9Z1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcd3Q6P9Z1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcd3Q6P9Z1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Smarcd3Q6P9Z1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcd3Q6P9Z1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcd3Q6P9Z1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcd3Q6P9Z1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcd3Q6P9Z1 Gm6821-201ENSMUST00000107540 542 ntBASIC20.44■□□□□ 0.86
Smarcd3Q6P9Z1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcd3Q6P9Z1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcd3Q6P9Z1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcd3Q6P9Z1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcd3Q6P9Z1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcd3Q6P9Z1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcd3Q6P9Z1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcd3Q6P9Z1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
Smarcd3Q6P9Z1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Smarcd3Q6P9Z1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcd3Q6P9Z1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcd3Q6P9Z1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Smarcd3Q6P9Z1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcd3Q6P9Z1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcd3Q6P9Z1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcd3Q6P9Z1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.4■□□□□ 0.86
Smarcd3Q6P9Z1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcd3Q6P9Z1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcd3Q6P9Z1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcd3Q6P9Z1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcd3Q6P9Z1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Smarcd3Q6P9Z1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcd3Q6P9Z1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Smarcd3Q6P9Z1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcd3Q6P9Z1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcd3Q6P9Z1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcd3Q6P9Z1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.39■□□□□ 0.85
Smarcd3Q6P9Z1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcd3Q6P9Z1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcd3Q6P9Z1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcd3Q6P9Z1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Smarcd3Q6P9Z1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcd3Q6P9Z1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcd3Q6P9Z1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcd3Q6P9Z1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcd3Q6P9Z1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.38■□□□□ 0.85
Smarcd3Q6P9Z1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Smarcd3Q6P9Z1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Smarcd3Q6P9Z1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcd3Q6P9Z1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcd3Q6P9Z1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcd3Q6P9Z1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcd3Q6P9Z1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcd3Q6P9Z1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcd3Q6P9Z1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcd3Q6P9Z1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcd3Q6P9Z1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcd3Q6P9Z1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.36■□□□□ 0.85
Smarcd3Q6P9Z1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcd3Q6P9Z1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcd3Q6P9Z1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcd3Q6P9Z1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Smarcd3Q6P9Z1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcd3Q6P9Z1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcd3Q6P9Z1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcd3Q6P9Z1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
Smarcd3Q6P9Z1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcd3Q6P9Z1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Smarcd3Q6P9Z1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcd3Q6P9Z1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms