Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox16Q62247 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox16Q62247 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox16Q62247 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Sox16Q62247 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox16Q62247 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox16Q62247 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox16Q62247 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sox16Q62247 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox16Q62247 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox16Q62247 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox16Q62247 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sox16Q62247 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox16Q62247 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox16Q62247 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox16Q62247 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sox16Q62247 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sox16Q62247 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sox16Q62247 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.06□□□□□ -0.32
Sox16Q62247 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox16Q62247 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sox16Q62247 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox16Q62247 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox16Q62247 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox16Q62247 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox16Q62247 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox16Q62247 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox16Q62247 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.04□□□□□ -0.32
Sox16Q62247 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC13.04□□□□□ -0.32
Sox16Q62247 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox16Q62247 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox16Q62247 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sox16Q62247 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox16Q62247 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox16Q62247 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox16Q62247 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox16Q62247 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox16Q62247 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox16Q62247 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox16Q62247 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox16Q62247 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sox16Q62247 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox16Q62247 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sox16Q62247 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox16Q62247 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox16Q62247 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Sox16Q62247 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox16Q62247 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC13.02□□□□□ -0.33
Sox16Q62247 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox16Q62247 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox16Q62247 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox16Q62247 Gm43006-201ENSMUST00000197702 1602 ntBASIC13.01□□□□□ -0.33
Sox16Q62247 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox16Q62247 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox16Q62247 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox16Q62247 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
Sox16Q62247 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox16Q62247 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox16Q62247 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox16Q62247 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox16Q62247 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC12.98□□□□□ -0.33
Sox16Q62247 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sox16Q62247 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox16Q62247 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox16Q62247 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox16Q62247 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox16Q62247 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sox16Q62247 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox16Q62247 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox16Q62247 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox16Q62247 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox16Q62247 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox16Q62247 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Sox16Q62247 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sox16Q62247 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox16Q62247 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Sox16Q62247 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox16Q62247 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sox16Q62247 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox16Q62247 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox16Q62247 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sox16Q62247 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox16Q62247 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC12.95□□□□□ -0.34
Sox16Q62247 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox16Q62247 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Sox16Q62247 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox16Q62247 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox16Q62247 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox16Q62247 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox16Q62247 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sox16Q62247 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Sox16Q62247 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox16Q62247 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox16Q62247 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sox16Q62247 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox16Q62247 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox16Q62247 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox16Q62247 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox16Q62247 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox16Q62247 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms