Protein–RNA interactions for Protein: Q61909

Runx1t1, Protein CBFA2T1, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Runx1t1Q61909 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
Runx1t1Q61909 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Runx1t1Q61909 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Runx1t1Q61909 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Runx1t1Q61909 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.32■■□□□ 1
Runx1t1Q61909 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.32■■□□□ 1
Runx1t1Q61909 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Runx1t1Q61909 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Runx1t1Q61909 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.31■■□□□ 1
Runx1t1Q61909 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.31■■□□□ 1
Runx1t1Q61909 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Runx1t1Q61909 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Runx1t1Q61909 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.3■■□□□ 1
Runx1t1Q61909 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
Runx1t1Q61909 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Runx1t1Q61909 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Runx1t1Q61909 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Runx1t1Q61909 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Runx1t1Q61909 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Runx1t1Q61909 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.29■■□□□ 1
Runx1t1Q61909 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Runx1t1Q61909 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Runx1t1Q61909 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Runx1t1Q61909 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.28■■□□□ 1
Runx1t1Q61909 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Runx1t1Q61909 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.28■■□□□ 1
Runx1t1Q61909 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Runx1t1Q61909 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Runx1t1Q61909 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Runx1t1Q61909 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Runx1t1Q61909 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Runx1t1Q61909 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Runx1t1Q61909 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.27■■□□□ 1
Runx1t1Q61909 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Runx1t1Q61909 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.27■■□□□ 1
Runx1t1Q61909 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Runx1t1Q61909 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Runx1t1Q61909 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Runx1t1Q61909 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Runx1t1Q61909 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Runx1t1Q61909 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Runx1t1Q61909 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Runx1t1Q61909 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Runx1t1Q61909 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Runx1t1Q61909 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Runx1t1Q61909 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Runx1t1Q61909 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Runx1t1Q61909 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Runx1t1Q61909 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Runx1t1Q61909 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Runx1t1Q61909 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Runx1t1Q61909 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Runx1t1Q61909 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Runx1t1Q61909 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Runx1t1Q61909 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Runx1t1Q61909 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Runx1t1Q61909 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Runx1t1Q61909 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Runx1t1Q61909 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.22■□□□□ 0.99
Runx1t1Q61909 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Runx1t1Q61909 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.22■□□□□ 0.99
Runx1t1Q61909 Gm7432-201ENSMUST00000210343 879 ntBASIC21.22■□□□□ 0.99
Runx1t1Q61909 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Runx1t1Q61909 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.22■□□□□ 0.99
Runx1t1Q61909 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Runx1t1Q61909 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.21■□□□□ 0.99
Runx1t1Q61909 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Runx1t1Q61909 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Runx1t1Q61909 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Runx1t1Q61909 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Runx1t1Q61909 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Runx1t1Q61909 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Runx1t1Q61909 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Runx1t1Q61909 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Runx1t1Q61909 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Runx1t1Q61909 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.19■□□□□ 0.98
Runx1t1Q61909 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Runx1t1Q61909 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Runx1t1Q61909 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Runx1t1Q61909 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Runx1t1Q61909 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.18■□□□□ 0.98
Runx1t1Q61909 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Runx1t1Q61909 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Runx1t1Q61909 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Runx1t1Q61909 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Runx1t1Q61909 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Runx1t1Q61909 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Runx1t1Q61909 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Runx1t1Q61909 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
Runx1t1Q61909 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Runx1t1Q61909 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Runx1t1Q61909 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.16■□□□□ 0.98
Runx1t1Q61909 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Runx1t1Q61909 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Runx1t1Q61909 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Runx1t1Q61909 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Runx1t1Q61909 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Runx1t1Q61909 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Runx1t1Q61909 Gm11599-201ENSMUST00000118720 878 ntBASIC21.15■□□□□ 0.98
Runx1t1Q61909 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms