Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ripk1Q60855 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ripk1Q60855 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ripk1Q60855 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ripk1Q60855 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ripk1Q60855 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ripk1Q60855 Gm9812-201ENSMUST00000061934 968 ntBASIC21.11■□□□□ 0.97
Ripk1Q60855 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ripk1Q60855 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ripk1Q60855 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ripk1Q60855 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ripk1Q60855 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ripk1Q60855 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ripk1Q60855 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ripk1Q60855 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ripk1Q60855 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ripk1Q60855 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ripk1Q60855 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.09■□□□□ 0.97
Ripk1Q60855 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ripk1Q60855 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ripk1Q60855 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.08■□□□□ 0.97
Ripk1Q60855 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.08■□□□□ 0.97
Ripk1Q60855 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Ripk1Q60855 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ripk1Q60855 Gm45364-201ENSMUST00000210883 159 ntBASIC21.07■□□□□ 0.96
Ripk1Q60855 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.07■□□□□ 0.96
Ripk1Q60855 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.07■□□□□ 0.96
Ripk1Q60855 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ripk1Q60855 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Ripk1Q60855 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ripk1Q60855 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.06■□□□□ 0.96
Ripk1Q60855 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ripk1Q60855 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.06■□□□□ 0.96
Ripk1Q60855 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ripk1Q60855 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ripk1Q60855 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ripk1Q60855 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ripk1Q60855 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ripk1Q60855 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.04■□□□□ 0.96
Ripk1Q60855 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ripk1Q60855 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ripk1Q60855 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Ripk1Q60855 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.04■□□□□ 0.96
Ripk1Q60855 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.04■□□□□ 0.96
Ripk1Q60855 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
Ripk1Q60855 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.04■□□□□ 0.96
Ripk1Q60855 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ripk1Q60855 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ripk1Q60855 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ripk1Q60855 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ripk1Q60855 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ripk1Q60855 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ripk1Q60855 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ripk1Q60855 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ripk1Q60855 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ripk1Q60855 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
Ripk1Q60855 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.02■□□□□ 0.95
Ripk1Q60855 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ripk1Q60855 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ripk1Q60855 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ripk1Q60855 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ripk1Q60855 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.01■□□□□ 0.95
Ripk1Q60855 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ripk1Q60855 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ripk1Q60855 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ripk1Q60855 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ripk1Q60855 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ripk1Q60855 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.99■□□□□ 0.95
Ripk1Q60855 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
Ripk1Q60855 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ripk1Q60855 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ripk1Q60855 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ripk1Q60855 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ripk1Q60855 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ripk1Q60855 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ripk1Q60855 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ripk1Q60855 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.97■□□□□ 0.95
Ripk1Q60855 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ripk1Q60855 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.96■□□□□ 0.95
Ripk1Q60855 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.96■□□□□ 0.95
Ripk1Q60855 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ripk1Q60855 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ripk1Q60855 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ripk1Q60855 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.94■□□□□ 0.94
Ripk1Q60855 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ripk1Q60855 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ripk1Q60855 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ripk1Q60855 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ripk1Q60855 Terc-201ENSMUST00000082862 423 ntBASIC20.93■□□□□ 0.94
Ripk1Q60855 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ripk1Q60855 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ripk1Q60855 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ripk1Q60855 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.92■□□□□ 0.94
Ripk1Q60855 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ripk1Q60855 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ripk1Q60855 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ripk1Q60855 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ripk1Q60855 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ripk1Q60855 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ripk1Q60855 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms