Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col12a1Q60847 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Col12a1Q60847 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.16■■□□□ 1.3
Col12a1Q60847 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col12a1Q60847 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.15■■□□□ 1.3
Col12a1Q60847 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Col12a1Q60847 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.15■■□□□ 1.3
Col12a1Q60847 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Col12a1Q60847 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.14■■□□□ 1.29
Col12a1Q60847 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col12a1Q60847 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.13■■□□□ 1.29
Col12a1Q60847 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Col12a1Q60847 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC23.12■■□□□ 1.29
Col12a1Q60847 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Col12a1Q60847 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Col12a1Q60847 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Col12a1Q60847 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col12a1Q60847 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.11■■□□□ 1.29
Col12a1Q60847 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.11■■□□□ 1.29
Col12a1Q60847 Slc35b2-207ENSMUST00000226086 850 ntBASIC23.11■■□□□ 1.29
Col12a1Q60847 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.11■■□□□ 1.29
Col12a1Q60847 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.1■■□□□ 1.29
Col12a1Q60847 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Col12a1Q60847 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Col12a1Q60847 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col12a1Q60847 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.09■■□□□ 1.29
Col12a1Q60847 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.09■■□□□ 1.29
Col12a1Q60847 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col12a1Q60847 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col12a1Q60847 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Col12a1Q60847 Gm44428-201ENSMUST00000204474 874 ntBASIC23.08■■□□□ 1.29
Col12a1Q60847 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.08■■□□□ 1.29
Col12a1Q60847 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Col12a1Q60847 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Col12a1Q60847 Gm13241-201ENSMUST00000094493 780 ntBASIC23.08■■□□□ 1.29
Col12a1Q60847 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Col12a1Q60847 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Col12a1Q60847 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col12a1Q60847 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Col12a1Q60847 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col12a1Q60847 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Col12a1Q60847 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Col12a1Q60847 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col12a1Q60847 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col12a1Q60847 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.05■■□□□ 1.28
Col12a1Q60847 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col12a1Q60847 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Col12a1Q60847 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col12a1Q60847 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col12a1Q60847 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col12a1Q60847 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Col12a1Q60847 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col12a1Q60847 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col12a1Q60847 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col12a1Q60847 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.03■■□□□ 1.28
Col12a1Q60847 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Col12a1Q60847 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col12a1Q60847 Gm43034-201ENSMUST00000198678 1364 ntBASIC23.01■■□□□ 1.27
Col12a1Q60847 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col12a1Q60847 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.01■■□□□ 1.27
Col12a1Q60847 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col12a1Q60847 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.01■■□□□ 1.27
Col12a1Q60847 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23■■□□□ 1.27
Col12a1Q60847 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Col12a1Q60847 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Col12a1Q60847 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
Col12a1Q60847 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col12a1Q60847 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Col12a1Q60847 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.98■■□□□ 1.27
Col12a1Q60847 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.98■■□□□ 1.27
Col12a1Q60847 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.97■■□□□ 1.27
Col12a1Q60847 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col12a1Q60847 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22.97■■□□□ 1.27
Col12a1Q60847 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col12a1Q60847 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Col12a1Q60847 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
Col12a1Q60847 Gm10232-201ENSMUST00000089221 720 ntBASIC22.97■■□□□ 1.27
Col12a1Q60847 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.96■■□□□ 1.27
Col12a1Q60847 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
Col12a1Q60847 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
Col12a1Q60847 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col12a1Q60847 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col12a1Q60847 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.95■■□□□ 1.26
Col12a1Q60847 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Col12a1Q60847 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.94■■□□□ 1.26
Col12a1Q60847 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Col12a1Q60847 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.94■■□□□ 1.26
Col12a1Q60847 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Col12a1Q60847 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Col12a1Q60847 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.93■■□□□ 1.26
Col12a1Q60847 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Col12a1Q60847 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Col12a1Q60847 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Col12a1Q60847 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Col12a1Q60847 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.91■■□□□ 1.26
Col12a1Q60847 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Col12a1Q60847 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Col12a1Q60847 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Col12a1Q60847 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Col12a1Q60847 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.88■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms