Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.12■■□□□ 1.29
Rnf43Q5NCP0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Rnf43Q5NCP0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf43Q5NCP0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Rnf43Q5NCP0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Rnf43Q5NCP0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Rnf43Q5NCP0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Rnf43Q5NCP0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf43Q5NCP0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf43Q5NCP0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf43Q5NCP0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf43Q5NCP0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Rnf43Q5NCP0 Gm13238-201ENSMUST00000117655 780 ntBASIC23.1■■□□□ 1.29
Rnf43Q5NCP0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf43Q5NCP0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf43Q5NCP0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf43Q5NCP0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf43Q5NCP0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf43Q5NCP0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf43Q5NCP0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rnf43Q5NCP0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.08■■□□□ 1.29
Rnf43Q5NCP0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Rnf43Q5NCP0 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.08■■□□□ 1.29
Rnf43Q5NCP0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rnf43Q5NCP0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf43Q5NCP0 Gm45444-201ENSMUST00000211394 898 ntBASIC23.07■■□□□ 1.28
Rnf43Q5NCP0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
Rnf43Q5NCP0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.07■■□□□ 1.28
Rnf43Q5NCP0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf43Q5NCP0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf43Q5NCP0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.06■■□□□ 1.28
Rnf43Q5NCP0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf43Q5NCP0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf43Q5NCP0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf43Q5NCP0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.05■■□□□ 1.28
Rnf43Q5NCP0 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.05■■□□□ 1.28
Rnf43Q5NCP0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf43Q5NCP0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf43Q5NCP0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf43Q5NCP0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf43Q5NCP0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rnf43Q5NCP0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rnf43Q5NCP0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.03■■□□□ 1.28
Rnf43Q5NCP0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.03■■□□□ 1.28
Rnf43Q5NCP0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rnf43Q5NCP0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf43Q5NCP0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Rnf43Q5NCP0 Rps24-207ENSMUST00000224568 714 ntBASIC23.01■■□□□ 1.27
Rnf43Q5NCP0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf43Q5NCP0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23■■□□□ 1.27
Rnf43Q5NCP0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23■■□□□ 1.27
Rnf43Q5NCP0 AC117769.4-201ENSMUST00000225679 685 ntBASIC23■■□□□ 1.27
Rnf43Q5NCP0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rnf43Q5NCP0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rnf43Q5NCP0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.99■■□□□ 1.27
Rnf43Q5NCP0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rnf43Q5NCP0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rnf43Q5NCP0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.98■■□□□ 1.27
Rnf43Q5NCP0 Gm15820-201ENSMUST00000201566 728 ntBASIC22.98■■□□□ 1.27
Rnf43Q5NCP0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.98■■□□□ 1.27
Rnf43Q5NCP0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rnf43Q5NCP0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf43Q5NCP0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf43Q5NCP0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.96■■□□□ 1.27
Rnf43Q5NCP0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rnf43Q5NCP0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Rnf43Q5NCP0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rnf43Q5NCP0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.96■■□□□ 1.27
Rnf43Q5NCP0 Gm45102-201ENSMUST00000207427 857 ntBASIC22.96■■□□□ 1.27
Rnf43Q5NCP0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Rnf43Q5NCP0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.96■■□□□ 1.27
Rnf43Q5NCP0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.96■■□□□ 1.27
Rnf43Q5NCP0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.96■■□□□ 1.27
Rnf43Q5NCP0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Rnf43Q5NCP0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.95■■□□□ 1.26
Rnf43Q5NCP0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf43Q5NCP0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.95■■□□□ 1.26
Rnf43Q5NCP0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Rnf43Q5NCP0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf43Q5NCP0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf43Q5NCP0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf43Q5NCP0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf43Q5NCP0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rnf43Q5NCP0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Rnf43Q5NCP0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rnf43Q5NCP0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.93■■□□□ 1.26
Rnf43Q5NCP0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.93■■□□□ 1.26
Rnf43Q5NCP0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rnf43Q5NCP0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rnf43Q5NCP0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.92■■□□□ 1.26
Rnf43Q5NCP0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rnf43Q5NCP0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rnf43Q5NCP0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rnf43Q5NCP0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rnf43Q5NCP0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rnf43Q5NCP0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Rnf43Q5NCP0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rnf43Q5NCP0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rnf43Q5NCP0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Rnf43Q5NCP0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms