Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rc3h1Q4VGL6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rc3h1Q4VGL6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Rc3h1Q4VGL6 Gm44428-201ENSMUST00000204474 874 ntBASIC26.35■■□□□ 1.81
Rc3h1Q4VGL6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rc3h1Q4VGL6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rc3h1Q4VGL6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Rc3h1Q4VGL6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Rc3h1Q4VGL6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Rc3h1Q4VGL6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.34■■□□□ 1.81
Rc3h1Q4VGL6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Rc3h1Q4VGL6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rc3h1Q4VGL6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rc3h1Q4VGL6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rc3h1Q4VGL6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rc3h1Q4VGL6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rc3h1Q4VGL6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.32■■□□□ 1.8
Rc3h1Q4VGL6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rc3h1Q4VGL6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Rc3h1Q4VGL6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Rc3h1Q4VGL6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rc3h1Q4VGL6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26.31■■□□□ 1.8
Rc3h1Q4VGL6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.31■■□□□ 1.8
Rc3h1Q4VGL6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.31■■□□□ 1.8
Rc3h1Q4VGL6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Rc3h1Q4VGL6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Rc3h1Q4VGL6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rc3h1Q4VGL6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Rc3h1Q4VGL6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rc3h1Q4VGL6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rc3h1Q4VGL6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rc3h1Q4VGL6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Rc3h1Q4VGL6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.28■■□□□ 1.8
Rc3h1Q4VGL6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rc3h1Q4VGL6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rc3h1Q4VGL6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.27■■□□□ 1.8
Rc3h1Q4VGL6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Rc3h1Q4VGL6 Gm10420-201ENSMUST00000121713 882 ntBASIC26.26■■□□□ 1.79
Rc3h1Q4VGL6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Rc3h1Q4VGL6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rc3h1Q4VGL6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Rc3h1Q4VGL6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Rc3h1Q4VGL6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rc3h1Q4VGL6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rc3h1Q4VGL6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rc3h1Q4VGL6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Rc3h1Q4VGL6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rc3h1Q4VGL6 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.25■■□□□ 1.79
Rc3h1Q4VGL6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.25■■□□□ 1.79
Rc3h1Q4VGL6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Rc3h1Q4VGL6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC26.24■■□□□ 1.79
Rc3h1Q4VGL6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Rc3h1Q4VGL6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Rc3h1Q4VGL6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Rc3h1Q4VGL6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rc3h1Q4VGL6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rc3h1Q4VGL6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rc3h1Q4VGL6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rc3h1Q4VGL6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.22■■□□□ 1.79
Rc3h1Q4VGL6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rc3h1Q4VGL6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Rc3h1Q4VGL6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC26.21■■□□□ 1.79
Rc3h1Q4VGL6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rc3h1Q4VGL6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
Rc3h1Q4VGL6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rc3h1Q4VGL6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rc3h1Q4VGL6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rc3h1Q4VGL6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.18■■□□□ 1.78
Rc3h1Q4VGL6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Rc3h1Q4VGL6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.17■■□□□ 1.78
Rc3h1Q4VGL6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.17■■□□□ 1.78
Rc3h1Q4VGL6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rc3h1Q4VGL6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.16■■□□□ 1.78
Rc3h1Q4VGL6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rc3h1Q4VGL6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Rc3h1Q4VGL6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Rc3h1Q4VGL6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rc3h1Q4VGL6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rc3h1Q4VGL6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rc3h1Q4VGL6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rc3h1Q4VGL6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
Rc3h1Q4VGL6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
Rc3h1Q4VGL6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rc3h1Q4VGL6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Rc3h1Q4VGL6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Rc3h1Q4VGL6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rc3h1Q4VGL6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rc3h1Q4VGL6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.12■■□□□ 1.77
Rc3h1Q4VGL6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC26.12■■□□□ 1.77
Rc3h1Q4VGL6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Rc3h1Q4VGL6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Rc3h1Q4VGL6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rc3h1Q4VGL6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rc3h1Q4VGL6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.1■■□□□ 1.77
Rc3h1Q4VGL6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rc3h1Q4VGL6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rc3h1Q4VGL6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rc3h1Q4VGL6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Rc3h1Q4VGL6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rc3h1Q4VGL6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms