Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf223Q3UV31 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.1■■□□□ 1.13
Rnf223Q3UV31 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.1■■□□□ 1.13
Rnf223Q3UV31 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf223Q3UV31 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf223Q3UV31 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf223Q3UV31 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Rnf223Q3UV31 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf223Q3UV31 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf223Q3UV31 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf223Q3UV31 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.08■■□□□ 1.13
Rnf223Q3UV31 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.08■■□□□ 1.13
Rnf223Q3UV31 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
Rnf223Q3UV31 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Rnf223Q3UV31 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Rnf223Q3UV31 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf223Q3UV31 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.06■■□□□ 1.12
Rnf223Q3UV31 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf223Q3UV31 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf223Q3UV31 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf223Q3UV31 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf223Q3UV31 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf223Q3UV31 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Rnf223Q3UV31 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf223Q3UV31 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf223Q3UV31 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf223Q3UV31 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf223Q3UV31 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Rnf223Q3UV31 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf223Q3UV31 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Rnf223Q3UV31 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf223Q3UV31 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf223Q3UV31 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.02■■□□□ 1.12
Rnf223Q3UV31 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.02■■□□□ 1.12
Rnf223Q3UV31 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf223Q3UV31 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Rnf223Q3UV31 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.01■■□□□ 1.11
Rnf223Q3UV31 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Rnf223Q3UV31 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.01■■□□□ 1.11
Rnf223Q3UV31 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf223Q3UV31 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Rnf223Q3UV31 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf223Q3UV31 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Rnf223Q3UV31 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf223Q3UV31 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf223Q3UV31 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf223Q3UV31 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf223Q3UV31 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf223Q3UV31 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf223Q3UV31 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf223Q3UV31 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.99■■□□□ 1.11
Rnf223Q3UV31 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.98■■□□□ 1.11
Rnf223Q3UV31 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Rnf223Q3UV31 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rnf223Q3UV31 Gm10420-201ENSMUST00000121713 882 ntBASIC21.98■■□□□ 1.11
Rnf223Q3UV31 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rnf223Q3UV31 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.98■■□□□ 1.11
Rnf223Q3UV31 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rnf223Q3UV31 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rnf223Q3UV31 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.97■■□□□ 1.11
Rnf223Q3UV31 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Rnf223Q3UV31 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Rnf223Q3UV31 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rnf223Q3UV31 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rnf223Q3UV31 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.96■■□□□ 1.11
Rnf223Q3UV31 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Rnf223Q3UV31 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rnf223Q3UV31 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.95■■□□□ 1.1
Rnf223Q3UV31 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Rnf223Q3UV31 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf223Q3UV31 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf223Q3UV31 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf223Q3UV31 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf223Q3UV31 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Rnf223Q3UV31 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Rnf223Q3UV31 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf223Q3UV31 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf223Q3UV31 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf223Q3UV31 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf223Q3UV31 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf223Q3UV31 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.91■■□□□ 1.1
Rnf223Q3UV31 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf223Q3UV31 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf223Q3UV31 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.9■■□□□ 1.1
Rnf223Q3UV31 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf223Q3UV31 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.89■■□□□ 1.1
Rnf223Q3UV31 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf223Q3UV31 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf223Q3UV31 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf223Q3UV31 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf223Q3UV31 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf223Q3UV31 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf223Q3UV31 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Rnf223Q3UV31 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Rnf223Q3UV31 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf223Q3UV31 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf223Q3UV31 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.87■■□□□ 1.09
Rnf223Q3UV31 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf223Q3UV31 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf223Q3UV31 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms