Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
Carmil3Q3UFQ8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Carmil3Q3UFQ8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC27.54■■■□□ 2
Carmil3Q3UFQ8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC27.54■■■□□ 2
Carmil3Q3UFQ8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Carmil3Q3UFQ8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC27.53■■■□□ 2
Carmil3Q3UFQ8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.53■■■□□ 2
Carmil3Q3UFQ8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC27.52■■■□□ 2
Carmil3Q3UFQ8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC27.52■■■□□ 2
Carmil3Q3UFQ8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Carmil3Q3UFQ8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Carmil3Q3UFQ8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
Carmil3Q3UFQ8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC27.5■■□□□ 1.99
Carmil3Q3UFQ8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC27.5■■□□□ 1.99
Carmil3Q3UFQ8 Gm15546-201ENSMUST00000122095 826 ntBASIC27.49■■□□□ 1.99
Carmil3Q3UFQ8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC27.49■■□□□ 1.99
Carmil3Q3UFQ8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Carmil3Q3UFQ8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Carmil3Q3UFQ8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Carmil3Q3UFQ8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Carmil3Q3UFQ8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Carmil3Q3UFQ8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Carmil3Q3UFQ8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
Carmil3Q3UFQ8 Gm22567-201ENSMUST00000175542 342 ntBASIC27.48■■□□□ 1.99
Carmil3Q3UFQ8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Carmil3Q3UFQ8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Carmil3Q3UFQ8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC27.48■■□□□ 1.99
Carmil3Q3UFQ8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Carmil3Q3UFQ8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Carmil3Q3UFQ8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Carmil3Q3UFQ8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
Carmil3Q3UFQ8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
Carmil3Q3UFQ8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
Carmil3Q3UFQ8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC27.47■■□□□ 1.99
Carmil3Q3UFQ8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
Carmil3Q3UFQ8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Carmil3Q3UFQ8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Carmil3Q3UFQ8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Carmil3Q3UFQ8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Carmil3Q3UFQ8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC27.45■■□□□ 1.98
Carmil3Q3UFQ8 Gm5522-201ENSMUST00000189483 1242 ntBASIC27.45■■□□□ 1.98
Carmil3Q3UFQ8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Carmil3Q3UFQ8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC27.44■■□□□ 1.98
Carmil3Q3UFQ8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Carmil3Q3UFQ8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Carmil3Q3UFQ8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Carmil3Q3UFQ8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Carmil3Q3UFQ8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
Carmil3Q3UFQ8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Carmil3Q3UFQ8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
Carmil3Q3UFQ8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
Carmil3Q3UFQ8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
Carmil3Q3UFQ8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Carmil3Q3UFQ8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
Carmil3Q3UFQ8 Gm43592-201ENSMUST00000196922 1165 ntBASIC27.4■■□□□ 1.98
Carmil3Q3UFQ8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
Carmil3Q3UFQ8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC27.39■■□□□ 1.98
Carmil3Q3UFQ8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC27.39■■□□□ 1.97
Carmil3Q3UFQ8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Carmil3Q3UFQ8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC27.38■■□□□ 1.97
Carmil3Q3UFQ8 Gm43566-201ENSMUST00000196851 808 ntBASIC27.35■■□□□ 1.97
Carmil3Q3UFQ8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Carmil3Q3UFQ8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Carmil3Q3UFQ8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Carmil3Q3UFQ8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Carmil3Q3UFQ8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
Carmil3Q3UFQ8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC27.34■■□□□ 1.97
Carmil3Q3UFQ8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Carmil3Q3UFQ8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Carmil3Q3UFQ8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Carmil3Q3UFQ8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
Carmil3Q3UFQ8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Carmil3Q3UFQ8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC27.33■■□□□ 1.97
Carmil3Q3UFQ8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Carmil3Q3UFQ8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC27.33■■□□□ 1.97
Carmil3Q3UFQ8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC27.33■■□□□ 1.97
Carmil3Q3UFQ8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.97
Carmil3Q3UFQ8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Carmil3Q3UFQ8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC27.33■■□□□ 1.97
Carmil3Q3UFQ8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC27.33■■□□□ 1.97
Carmil3Q3UFQ8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Carmil3Q3UFQ8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Carmil3Q3UFQ8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Carmil3Q3UFQ8 Gm13238-201ENSMUST00000117655 780 ntBASIC27.31■■□□□ 1.96
Carmil3Q3UFQ8 Gm45444-201ENSMUST00000211394 898 ntBASIC27.31■■□□□ 1.96
Carmil3Q3UFQ8 Nsd1-203ENSMUST00000224156 1149 ntBASIC27.31■■□□□ 1.96
Carmil3Q3UFQ8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Carmil3Q3UFQ8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Carmil3Q3UFQ8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Carmil3Q3UFQ8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
Carmil3Q3UFQ8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Carmil3Q3UFQ8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC27.29■■□□□ 1.96
Carmil3Q3UFQ8 AC117769.4-201ENSMUST00000225679 685 ntBASIC27.29■■□□□ 1.96
Carmil3Q3UFQ8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC27.29■■□□□ 1.96
Carmil3Q3UFQ8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Carmil3Q3UFQ8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Carmil3Q3UFQ8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC27.28■■□□□ 1.96
Carmil3Q3UFQ8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
Carmil3Q3UFQ8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Carmil3Q3UFQ8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC27.27■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 144.6 ms