Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmem88bQ3TYP4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.78■□□□□ 0.6
Tmem88bQ3TYP4 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.78■□□□□ 0.6
Tmem88bQ3TYP4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.77■□□□□ 0.6
Tmem88bQ3TYP4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tmem88bQ3TYP4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmem88bQ3TYP4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tmem88bQ3TYP4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tmem88bQ3TYP4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Tmem88bQ3TYP4 Gm13238-201ENSMUST00000117655 780 ntBASIC18.75■□□□□ 0.59
Tmem88bQ3TYP4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tmem88bQ3TYP4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Tmem88bQ3TYP4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.75■□□□□ 0.59
Tmem88bQ3TYP4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Tmem88bQ3TYP4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tmem88bQ3TYP4 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.75■□□□□ 0.59
Tmem88bQ3TYP4 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.75■□□□□ 0.59
Tmem88bQ3TYP4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tmem88bQ3TYP4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Tmem88bQ3TYP4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.74■□□□□ 0.59
Tmem88bQ3TYP4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tmem88bQ3TYP4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmem88bQ3TYP4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tmem88bQ3TYP4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem88bQ3TYP4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem88bQ3TYP4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem88bQ3TYP4 Gm14117-201ENSMUST00000122417 843 ntBASIC18.73■□□□□ 0.59
Tmem88bQ3TYP4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem88bQ3TYP4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.73■□□□□ 0.59
Tmem88bQ3TYP4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem88bQ3TYP4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem88bQ3TYP4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem88bQ3TYP4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem88bQ3TYP4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem88bQ3TYP4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem88bQ3TYP4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem88bQ3TYP4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem88bQ3TYP4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem88bQ3TYP4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem88bQ3TYP4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tmem88bQ3TYP4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tmem88bQ3TYP4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tmem88bQ3TYP4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.71■□□□□ 0.59
Tmem88bQ3TYP4 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.71■□□□□ 0.59
Tmem88bQ3TYP4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Tmem88bQ3TYP4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Tmem88bQ3TYP4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Tmem88bQ3TYP4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Tmem88bQ3TYP4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Tmem88bQ3TYP4 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.7■□□□□ 0.58
Tmem88bQ3TYP4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmem88bQ3TYP4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmem88bQ3TYP4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmem88bQ3TYP4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmem88bQ3TYP4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.69■□□□□ 0.58
Tmem88bQ3TYP4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmem88bQ3TYP4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmem88bQ3TYP4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmem88bQ3TYP4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.68■□□□□ 0.58
Tmem88bQ3TYP4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tmem88bQ3TYP4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmem88bQ3TYP4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmem88bQ3TYP4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tmem88bQ3TYP4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
Tmem88bQ3TYP4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmem88bQ3TYP4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.67■□□□□ 0.58
Tmem88bQ3TYP4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.67■□□□□ 0.58
Tmem88bQ3TYP4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmem88bQ3TYP4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmem88bQ3TYP4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Tmem88bQ3TYP4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.66■□□□□ 0.58
Tmem88bQ3TYP4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Tmem88bQ3TYP4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tmem88bQ3TYP4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tmem88bQ3TYP4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tmem88bQ3TYP4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tmem88bQ3TYP4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tmem88bQ3TYP4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tmem88bQ3TYP4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.64■□□□□ 0.57
Tmem88bQ3TYP4 Gm9959-201ENSMUST00000068277 390 ntBASIC18.64■□□□□ 0.57
Tmem88bQ3TYP4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tmem88bQ3TYP4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tmem88bQ3TYP4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tmem88bQ3TYP4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.63■□□□□ 0.57
Tmem88bQ3TYP4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.63■□□□□ 0.57
Tmem88bQ3TYP4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tmem88bQ3TYP4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tmem88bQ3TYP4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.62■□□□□ 0.57
Tmem88bQ3TYP4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem88bQ3TYP4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem88bQ3TYP4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem88bQ3TYP4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Tmem88bQ3TYP4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem88bQ3TYP4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tmem88bQ3TYP4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Tmem88bQ3TYP4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem88bQ3TYP4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Tmem88bQ3TYP4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tmem88bQ3TYP4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmem88bQ3TYP4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms