Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Treml4Q3LRV9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Treml4Q3LRV9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Treml4Q3LRV9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.17■□□□□ 0.98
Treml4Q3LRV9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Treml4Q3LRV9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Treml4Q3LRV9 Gm44428-201ENSMUST00000204474 874 ntBASIC21.16■□□□□ 0.98
Treml4Q3LRV9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Treml4Q3LRV9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Treml4Q3LRV9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Treml4Q3LRV9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Treml4Q3LRV9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Treml4Q3LRV9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Treml4Q3LRV9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Treml4Q3LRV9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Treml4Q3LRV9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Treml4Q3LRV9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Treml4Q3LRV9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Treml4Q3LRV9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Treml4Q3LRV9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.13■□□□□ 0.97
Treml4Q3LRV9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Treml4Q3LRV9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Treml4Q3LRV9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Treml4Q3LRV9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Treml4Q3LRV9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.12■□□□□ 0.97
Treml4Q3LRV9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.11■□□□□ 0.97
Treml4Q3LRV9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.11■□□□□ 0.97
Treml4Q3LRV9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Treml4Q3LRV9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Treml4Q3LRV9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.1■□□□□ 0.97
Treml4Q3LRV9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Treml4Q3LRV9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.1■□□□□ 0.97
Treml4Q3LRV9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Treml4Q3LRV9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.1■□□□□ 0.97
Treml4Q3LRV9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Treml4Q3LRV9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Treml4Q3LRV9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Treml4Q3LRV9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.1■□□□□ 0.97
Treml4Q3LRV9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.1■□□□□ 0.97
Treml4Q3LRV9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.09■□□□□ 0.97
Treml4Q3LRV9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Treml4Q3LRV9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.09■□□□□ 0.97
Treml4Q3LRV9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Treml4Q3LRV9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Treml4Q3LRV9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Treml4Q3LRV9 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.08■□□□□ 0.96
Treml4Q3LRV9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Treml4Q3LRV9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Treml4Q3LRV9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
Treml4Q3LRV9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Treml4Q3LRV9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Treml4Q3LRV9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Treml4Q3LRV9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Treml4Q3LRV9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.07■□□□□ 0.96
Treml4Q3LRV9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Treml4Q3LRV9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Treml4Q3LRV9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Treml4Q3LRV9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Treml4Q3LRV9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Treml4Q3LRV9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Treml4Q3LRV9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Treml4Q3LRV9 Gm43566-201ENSMUST00000196851 808 ntBASIC21.06■□□□□ 0.96
Treml4Q3LRV9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Treml4Q3LRV9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Treml4Q3LRV9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Treml4Q3LRV9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Treml4Q3LRV9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.05■□□□□ 0.96
Treml4Q3LRV9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Treml4Q3LRV9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Treml4Q3LRV9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Treml4Q3LRV9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Treml4Q3LRV9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Treml4Q3LRV9 Rps24-207ENSMUST00000224568 714 ntBASIC21.04■□□□□ 0.96
Treml4Q3LRV9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Treml4Q3LRV9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Treml4Q3LRV9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Treml4Q3LRV9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Treml4Q3LRV9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.02■□□□□ 0.96
Treml4Q3LRV9 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.01■□□□□ 0.95
Treml4Q3LRV9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Treml4Q3LRV9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Treml4Q3LRV9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Treml4Q3LRV9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Treml4Q3LRV9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Treml4Q3LRV9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21■□□□□ 0.95
Treml4Q3LRV9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21■□□□□ 0.95
Treml4Q3LRV9 Gm43592-201ENSMUST00000196922 1165 ntBASIC21■□□□□ 0.95
Treml4Q3LRV9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Treml4Q3LRV9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Treml4Q3LRV9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Treml4Q3LRV9 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.99■□□□□ 0.95
Treml4Q3LRV9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Treml4Q3LRV9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Treml4Q3LRV9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Treml4Q3LRV9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Treml4Q3LRV9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Treml4Q3LRV9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Treml4Q3LRV9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Treml4Q3LRV9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Treml4Q3LRV9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 273.4 ms