Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Atf4Q06507 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atf4Q06507 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atf4Q06507 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Atf4Q06507 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atf4Q06507 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Atf4Q06507 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atf4Q06507 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Atf4Q06507 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Atf4Q06507 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atf4Q06507 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Atf4Q06507 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.04■□□□□ 0.96
Atf4Q06507 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Atf4Q06507 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Atf4Q06507 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Atf4Q06507 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atf4Q06507 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atf4Q06507 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Atf4Q06507 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Atf4Q06507 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Atf4Q06507 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.01■□□□□ 0.95
Atf4Q06507 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.01■□□□□ 0.95
Atf4Q06507 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Atf4Q06507 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Atf4Q06507 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21■□□□□ 0.95
Atf4Q06507 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21■□□□□ 0.95
Atf4Q06507 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atf4Q06507 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atf4Q06507 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atf4Q06507 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atf4Q06507 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Atf4Q06507 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Atf4Q06507 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Atf4Q06507 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Atf4Q06507 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf4Q06507 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.97■□□□□ 0.95
Atf4Q06507 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.97■□□□□ 0.95
Atf4Q06507 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf4Q06507 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Atf4Q06507 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf4Q06507 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Atf4Q06507 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atf4Q06507 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Atf4Q06507 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.95■□□□□ 0.94
Atf4Q06507 Terc-201ENSMUST00000082862 423 ntBASIC20.95■□□□□ 0.94
Atf4Q06507 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atf4Q06507 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atf4Q06507 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atf4Q06507 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.94■□□□□ 0.94
Atf4Q06507 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.94■□□□□ 0.94
Atf4Q06507 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.94■□□□□ 0.94
Atf4Q06507 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Atf4Q06507 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atf4Q06507 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atf4Q06507 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.94■□□□□ 0.94
Atf4Q06507 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atf4Q06507 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atf4Q06507 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf4Q06507 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Atf4Q06507 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf4Q06507 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf4Q06507 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf4Q06507 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Atf4Q06507 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Atf4Q06507 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Atf4Q06507 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Atf4Q06507 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Atf4Q06507 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Atf4Q06507 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atf4Q06507 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.9■□□□□ 0.94
Atf4Q06507 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.9■□□□□ 0.94
Atf4Q06507 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.9■□□□□ 0.94
Atf4Q06507 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.9■□□□□ 0.94
Atf4Q06507 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atf4Q06507 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Atf4Q06507 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Atf4Q06507 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atf4Q06507 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Atf4Q06507 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Atf4Q06507 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.88■□□□□ 0.93
Atf4Q06507 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atf4Q06507 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.88■□□□□ 0.93
Atf4Q06507 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atf4Q06507 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Atf4Q06507 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Atf4Q06507 Rps24-207ENSMUST00000224568 714 ntBASIC20.88■□□□□ 0.93
Atf4Q06507 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atf4Q06507 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Atf4Q06507 Gm43566-201ENSMUST00000196851 808 ntBASIC20.87■□□□□ 0.93
Atf4Q06507 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Atf4Q06507 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Atf4Q06507 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Atf4Q06507 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atf4Q06507 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atf4Q06507 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.86■□□□□ 0.93
Atf4Q06507 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.86■□□□□ 0.93
Atf4Q06507 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Atf4Q06507 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atf4Q06507 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atf4Q06507 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 136.1 ms