Protein–RNA interactions for Protein: P97357

Taf1a, TATA box-binding protein-associated factor RNA polymerase I subunit A, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1aP97357 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Taf1aP97357 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.68■□□□□ 0.9
Taf1aP97357 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Taf1aP97357 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Taf1aP97357 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.68■□□□□ 0.9
Taf1aP97357 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Taf1aP97357 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Taf1aP97357 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Taf1aP97357 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Taf1aP97357 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.67■□□□□ 0.9
Taf1aP97357 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Taf1aP97357 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Taf1aP97357 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Taf1aP97357 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Taf1aP97357 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
Taf1aP97357 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.66■□□□□ 0.9
Taf1aP97357 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Taf1aP97357 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Taf1aP97357 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Taf1aP97357 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Taf1aP97357 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Taf1aP97357 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Taf1aP97357 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.65■□□□□ 0.9
Taf1aP97357 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Taf1aP97357 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Taf1aP97357 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Taf1aP97357 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Taf1aP97357 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Taf1aP97357 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Taf1aP97357 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Taf1aP97357 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Taf1aP97357 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Taf1aP97357 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Taf1aP97357 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Taf1aP97357 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Taf1aP97357 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Taf1aP97357 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.62■□□□□ 0.89
Taf1aP97357 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Taf1aP97357 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Taf1aP97357 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Taf1aP97357 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.61■□□□□ 0.89
Taf1aP97357 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Taf1aP97357 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Taf1aP97357 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Taf1aP97357 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Taf1aP97357 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Taf1aP97357 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Taf1aP97357 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.61■□□□□ 0.89
Taf1aP97357 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Taf1aP97357 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Taf1aP97357 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Taf1aP97357 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Taf1aP97357 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Taf1aP97357 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Taf1aP97357 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Taf1aP97357 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Taf1aP97357 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.58■□□□□ 0.89
Taf1aP97357 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Taf1aP97357 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.58■□□□□ 0.89
Taf1aP97357 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Taf1aP97357 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Taf1aP97357 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Taf1aP97357 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Taf1aP97357 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Taf1aP97357 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Taf1aP97357 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Taf1aP97357 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
Taf1aP97357 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Taf1aP97357 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Taf1aP97357 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.57■□□□□ 0.88
Taf1aP97357 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Taf1aP97357 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Taf1aP97357 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Taf1aP97357 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Taf1aP97357 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Taf1aP97357 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Taf1aP97357 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.55■□□□□ 0.88
Taf1aP97357 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Taf1aP97357 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Taf1aP97357 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Taf1aP97357 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Taf1aP97357 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Taf1aP97357 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Taf1aP97357 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Taf1aP97357 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Taf1aP97357 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Taf1aP97357 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Taf1aP97357 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Taf1aP97357 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Taf1aP97357 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Taf1aP97357 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Taf1aP97357 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Taf1aP97357 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Taf1aP97357 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Taf1aP97357 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Taf1aP97357 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Taf1aP97357 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Taf1aP97357 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Taf1aP97357 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Taf1aP97357 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms