Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cxcr4P70658 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cxcr4P70658 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cxcr4P70658 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Cxcr4P70658 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cxcr4P70658 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Cxcr4P70658 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Cxcr4P70658 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cxcr4P70658 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cxcr4P70658 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cxcr4P70658 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cxcr4P70658 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cxcr4P70658 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.98■□□□□ 0.95
Cxcr4P70658 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cxcr4P70658 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cxcr4P70658 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cxcr4P70658 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cxcr4P70658 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.97■□□□□ 0.95
Cxcr4P70658 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cxcr4P70658 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
Cxcr4P70658 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cxcr4P70658 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cxcr4P70658 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Cxcr4P70658 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cxcr4P70658 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cxcr4P70658 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.95■□□□□ 0.94
Cxcr4P70658 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cxcr4P70658 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cxcr4P70658 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cxcr4P70658 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.94■□□□□ 0.94
Cxcr4P70658 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cxcr4P70658 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Cxcr4P70658 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cxcr4P70658 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cxcr4P70658 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cxcr4P70658 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cxcr4P70658 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.93■□□□□ 0.94
Cxcr4P70658 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cxcr4P70658 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cxcr4P70658 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cxcr4P70658 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cxcr4P70658 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cxcr4P70658 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cxcr4P70658 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cxcr4P70658 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cxcr4P70658 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cxcr4P70658 Gm37136-201ENSMUST00000194368 194 ntBASIC20.92■□□□□ 0.94
Cxcr4P70658 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cxcr4P70658 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cxcr4P70658 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cxcr4P70658 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.91■□□□□ 0.94
Cxcr4P70658 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Cxcr4P70658 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cxcr4P70658 Gm6311-201ENSMUST00000073790 878 ntBASIC20.91■□□□□ 0.94
Cxcr4P70658 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cxcr4P70658 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cxcr4P70658 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cxcr4P70658 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Cxcr4P70658 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cxcr4P70658 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cxcr4P70658 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cxcr4P70658 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.9■□□□□ 0.94
Cxcr4P70658 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cxcr4P70658 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cxcr4P70658 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cxcr4P70658 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Cxcr4P70658 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cxcr4P70658 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Cxcr4P70658 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cxcr4P70658 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Cxcr4P70658 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cxcr4P70658 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Cxcr4P70658 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cxcr4P70658 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcr4P70658 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.87■□□□□ 0.93
Cxcr4P70658 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcr4P70658 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcr4P70658 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.87■□□□□ 0.93
Cxcr4P70658 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.87■□□□□ 0.93
Cxcr4P70658 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.87■□□□□ 0.93
Cxcr4P70658 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcr4P70658 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcr4P70658 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcr4P70658 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcr4P70658 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cxcr4P70658 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcr4P70658 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cxcr4P70658 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cxcr4P70658 Gm4799-201ENSMUST00000095396 657 ntBASIC20.86■□□□□ 0.93
Cxcr4P70658 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cxcr4P70658 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cxcr4P70658 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cxcr4P70658 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cxcr4P70658 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cxcr4P70658 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cxcr4P70658 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Cxcr4P70658 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Cxcr4P70658 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cxcr4P70658 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cxcr4P70658 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms