Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm6P62313 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm6P62313 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm6P62313 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm6P62313 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.71■□□□□ 0.75
Lsm6P62313 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.71■□□□□ 0.75
Lsm6P62313 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm6P62313 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm6P62313 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm6P62313 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm6P62313 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm6P62313 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm6P62313 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm6P62313 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm6P62313 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm6P62313 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.68■□□□□ 0.74
Lsm6P62313 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lsm6P62313 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lsm6P62313 Terc-201ENSMUST00000082862 423 ntBASIC19.67■□□□□ 0.74
Lsm6P62313 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lsm6P62313 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lsm6P62313 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lsm6P62313 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.66■□□□□ 0.74
Lsm6P62313 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsm6P62313 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm6P62313 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm6P62313 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm6P62313 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.65■□□□□ 0.74
Lsm6P62313 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm6P62313 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lsm6P62313 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lsm6P62313 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.64■□□□□ 0.73
Lsm6P62313 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.64■□□□□ 0.73
Lsm6P62313 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.63■□□□□ 0.73
Lsm6P62313 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm6P62313 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm6P62313 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Lsm6P62313 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.62■□□□□ 0.73
Lsm6P62313 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm6P62313 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm6P62313 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm6P62313 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Lsm6P62313 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm6P62313 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.61■□□□□ 0.73
Lsm6P62313 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm6P62313 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Lsm6P62313 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm6P62313 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm6P62313 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.6■□□□□ 0.73
Lsm6P62313 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm6P62313 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm6P62313 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm6P62313 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm6P62313 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm6P62313 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm6P62313 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.59■□□□□ 0.73
Lsm6P62313 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm6P62313 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.59■□□□□ 0.73
Lsm6P62313 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm6P62313 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm6P62313 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Lsm6P62313 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
Lsm6P62313 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.58■□□□□ 0.72
Lsm6P62313 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.58■□□□□ 0.72
Lsm6P62313 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Lsm6P62313 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.58■□□□□ 0.72
Lsm6P62313 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Lsm6P62313 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Lsm6P62313 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lsm6P62313 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm6P62313 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm6P62313 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm6P62313 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.57■□□□□ 0.72
Lsm6P62313 Gm6311-201ENSMUST00000073790 878 ntBASIC19.57■□□□□ 0.72
Lsm6P62313 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm6P62313 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Lsm6P62313 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Lsm6P62313 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm6P62313 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.56■□□□□ 0.72
Lsm6P62313 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm6P62313 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm6P62313 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm6P62313 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm6P62313 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm6P62313 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Lsm6P62313 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm6P62313 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm6P62313 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm6P62313 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm6P62313 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Lsm6P62313 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Lsm6P62313 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
Lsm6P62313 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Lsm6P62313 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm6P62313 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Lsm6P62313 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm6P62313 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm6P62313 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm6P62313 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm6P62313 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms