Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Upk2P38575 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Upk2P38575 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Upk2P38575 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.77■□□□□ 0.76
Upk2P38575 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upk2P38575 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upk2P38575 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.76■□□□□ 0.75
Upk2P38575 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Upk2P38575 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upk2P38575 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Upk2P38575 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upk2P38575 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Upk2P38575 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upk2P38575 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upk2P38575 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upk2P38575 Terc-201ENSMUST00000082862 423 ntBASIC19.74■□□□□ 0.75
Upk2P38575 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Upk2P38575 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Upk2P38575 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk2P38575 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.73■□□□□ 0.75
Upk2P38575 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Upk2P38575 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.73■□□□□ 0.75
Upk2P38575 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Upk2P38575 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.73■□□□□ 0.75
Upk2P38575 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Upk2P38575 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk2P38575 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk2P38575 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk2P38575 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upk2P38575 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Upk2P38575 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Upk2P38575 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.7■□□□□ 0.74
Upk2P38575 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Upk2P38575 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.7■□□□□ 0.74
Upk2P38575 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Upk2P38575 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.7■□□□□ 0.74
Upk2P38575 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Upk2P38575 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk2P38575 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.69■□□□□ 0.74
Upk2P38575 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.69■□□□□ 0.74
Upk2P38575 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk2P38575 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk2P38575 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Upk2P38575 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk2P38575 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.68■□□□□ 0.74
Upk2P38575 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk2P38575 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.68■□□□□ 0.74
Upk2P38575 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk2P38575 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk2P38575 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk2P38575 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk2P38575 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
Upk2P38575 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Upk2P38575 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Upk2P38575 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Upk2P38575 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.67■□□□□ 0.74
Upk2P38575 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Upk2P38575 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.67■□□□□ 0.74
Upk2P38575 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.67■□□□□ 0.74
Upk2P38575 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Upk2P38575 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upk2P38575 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.66■□□□□ 0.74
Upk2P38575 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Upk2P38575 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Upk2P38575 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Upk2P38575 Gm6311-201ENSMUST00000073790 878 ntBASIC19.65■□□□□ 0.74
Upk2P38575 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upk2P38575 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upk2P38575 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upk2P38575 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Upk2P38575 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upk2P38575 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upk2P38575 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upk2P38575 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upk2P38575 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Upk2P38575 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Upk2P38575 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Upk2P38575 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upk2P38575 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Upk2P38575 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.62■□□□□ 0.73
Upk2P38575 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Upk2P38575 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upk2P38575 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upk2P38575 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Upk2P38575 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Upk2P38575 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Upk2P38575 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Upk2P38575 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Upk2P38575 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Upk2P38575 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Upk2P38575 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Upk2P38575 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Upk2P38575 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upk2P38575 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upk2P38575 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Upk2P38575 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upk2P38575 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Upk2P38575 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upk2P38575 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Upk2P38575 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms