Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd28P31041 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd28P31041 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd28P31041 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cd28P31041 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.82■□□□□ 0.76
Cd28P31041 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Cd28P31041 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cd28P31041 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd28P31041 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cd28P31041 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cd28P31041 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd28P31041 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cd28P31041 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cd28P31041 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd28P31041 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Cd28P31041 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd28P31041 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd28P31041 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.8■□□□□ 0.76
Cd28P31041 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cd28P31041 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cd28P31041 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Cd28P31041 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.8■□□□□ 0.76
Cd28P31041 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cd28P31041 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd28P31041 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cd28P31041 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd28P31041 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.79■□□□□ 0.76
Cd28P31041 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd28P31041 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd28P31041 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd28P31041 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd28P31041 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.78■□□□□ 0.76
Cd28P31041 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.78■□□□□ 0.76
Cd28P31041 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd28P31041 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd28P31041 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cd28P31041 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd28P31041 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
Cd28P31041 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd28P31041 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Cd28P31041 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cd28P31041 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cd28P31041 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cd28P31041 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cd28P31041 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cd28P31041 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cd28P31041 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cd28P31041 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.75■□□□□ 0.75
Cd28P31041 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cd28P31041 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cd28P31041 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd28P31041 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.73■□□□□ 0.75
Cd28P31041 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd28P31041 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd28P31041 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cd28P31041 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.73■□□□□ 0.75
Cd28P31041 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cd28P31041 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd28P31041 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cd28P31041 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cd28P31041 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd28P31041 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cd28P31041 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd28P31041 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd28P31041 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd28P31041 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cd28P31041 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd28P31041 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cd28P31041 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd28P31041 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd28P31041 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd28P31041 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.71■□□□□ 0.75
Cd28P31041 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd28P31041 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd28P31041 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd28P31041 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cd28P31041 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cd28P31041 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd28P31041 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd28P31041 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd28P31041 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.69■□□□□ 0.74
Cd28P31041 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd28P31041 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd28P31041 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cd28P31041 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cd28P31041 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cd28P31041 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd28P31041 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.68■□□□□ 0.74
Cd28P31041 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cd28P31041 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cd28P31041 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cd28P31041 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd28P31041 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd28P31041 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cd28P31041 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd28P31041 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd28P31041 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd28P31041 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd28P31041 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd28P31041 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms