Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cd40P27512 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd40P27512 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cd40P27512 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd40P27512 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd40P27512 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.43■□□□□ 0.86
Cd40P27512 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cd40P27512 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd40P27512 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cd40P27512 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd40P27512 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.42■□□□□ 0.86
Cd40P27512 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd40P27512 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Cd40P27512 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd40P27512 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd40P27512 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd40P27512 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd40P27512 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd40P27512 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.41■□□□□ 0.86
Cd40P27512 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd40P27512 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd40P27512 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cd40P27512 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cd40P27512 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Cd40P27512 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cd40P27512 Gm11687-201ENSMUST00000118911 886 ntBASIC20.39■□□□□ 0.85
Cd40P27512 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cd40P27512 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cd40P27512 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cd40P27512 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cd40P27512 Gm16437-201ENSMUST00000025669 507 ntBASIC20.38■□□□□ 0.85
Cd40P27512 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cd40P27512 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cd40P27512 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd40P27512 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.37■□□□□ 0.85
Cd40P27512 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.37■□□□□ 0.85
Cd40P27512 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd40P27512 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd40P27512 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd40P27512 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd40P27512 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cd40P27512 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd40P27512 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cd40P27512 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd40P27512 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd40P27512 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd40P27512 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.36■□□□□ 0.85
Cd40P27512 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd40P27512 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd40P27512 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.35■□□□□ 0.85
Cd40P27512 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd40P27512 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cd40P27512 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd40P27512 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.35■□□□□ 0.85
Cd40P27512 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd40P27512 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd40P27512 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cd40P27512 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cd40P27512 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.34■□□□□ 0.85
Cd40P27512 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd40P27512 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cd40P27512 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.33■□□□□ 0.84
Cd40P27512 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cd40P27512 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd40P27512 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd40P27512 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd40P27512 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd40P27512 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cd40P27512 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cd40P27512 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.31■□□□□ 0.84
Cd40P27512 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cd40P27512 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cd40P27512 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cd40P27512 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cd40P27512 Gm11175-201ENSMUST00000116172 543 ntBASIC20.3■□□□□ 0.84
Cd40P27512 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cd40P27512 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cd40P27512 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cd40P27512 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd40P27512 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd40P27512 Gm44428-201ENSMUST00000204474 874 ntBASIC20.29■□□□□ 0.84
Cd40P27512 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cd40P27512 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cd40P27512 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd40P27512 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd40P27512 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.28■□□□□ 0.84
Cd40P27512 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd40P27512 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cd40P27512 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd40P27512 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cd40P27512 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.28■□□□□ 0.84
Cd40P27512 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cd40P27512 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd40P27512 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.27■□□□□ 0.84
Cd40P27512 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cd40P27512 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd40P27512 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd40P27512 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.27■□□□□ 0.83
Cd40P27512 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Cd40P27512 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms