Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Hmgn1P18608 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
Hmgn1P18608 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmgn1P18608 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgn1P18608 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgn1P18608 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgn1P18608 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgn1P18608 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgn1P18608 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgn1P18608 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.62■□□□□ 0.89
Hmgn1P18608 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Hmgn1P18608 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmgn1P18608 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmgn1P18608 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmgn1P18608 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgn1P18608 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgn1P18608 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgn1P18608 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgn1P18608 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Hmgn1P18608 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgn1P18608 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgn1P18608 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgn1P18608 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgn1P18608 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgn1P18608 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgn1P18608 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hmgn1P18608 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hmgn1P18608 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmgn1P18608 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.58■□□□□ 0.89
Hmgn1P18608 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmgn1P18608 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.57■□□□□ 0.88
Hmgn1P18608 Gm37136-201ENSMUST00000194368 194 ntBASIC20.57■□□□□ 0.88
Hmgn1P18608 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmgn1P18608 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmgn1P18608 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmgn1P18608 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Hmgn1P18608 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.56■□□□□ 0.88
Hmgn1P18608 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmgn1P18608 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.56■□□□□ 0.88
Hmgn1P18608 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgn1P18608 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgn1P18608 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgn1P18608 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmgn1P18608 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmgn1P18608 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.54■□□□□ 0.88
Hmgn1P18608 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hmgn1P18608 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmgn1P18608 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgn1P18608 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.53■□□□□ 0.88
Hmgn1P18608 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Hmgn1P18608 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgn1P18608 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgn1P18608 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgn1P18608 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Hmgn1P18608 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgn1P18608 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgn1P18608 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgn1P18608 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.87
Hmgn1P18608 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Hmgn1P18608 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Hmgn1P18608 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgn1P18608 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgn1P18608 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgn1P18608 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.51■□□□□ 0.87
Hmgn1P18608 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgn1P18608 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.5■□□□□ 0.87
Hmgn1P18608 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmgn1P18608 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hmgn1P18608 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmgn1P18608 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Hmgn1P18608 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.49■□□□□ 0.87
Hmgn1P18608 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.49■□□□□ 0.87
Hmgn1P18608 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgn1P18608 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Hmgn1P18608 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Hmgn1P18608 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmgn1P18608 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Hmgn1P18608 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.47■□□□□ 0.87
Hmgn1P18608 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgn1P18608 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgn1P18608 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.46■□□□□ 0.87
Hmgn1P18608 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Hmgn1P18608 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgn1P18608 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgn1P18608 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgn1P18608 Nkain2-201ENSMUST00000092602 558 ntBASIC20.45■□□□□ 0.86
Hmgn1P18608 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgn1P18608 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgn1P18608 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgn1P18608 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgn1P18608 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgn1P18608 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgn1P18608 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgn1P18608 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgn1P18608 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgn1P18608 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgn1P18608 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgn1P18608 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgn1P18608 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgn1P18608 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms