Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Nid1P10493 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nid1P10493 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nid1P10493 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nid1P10493 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.15■□□□□ 0.98
Nid1P10493 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nid1P10493 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nid1P10493 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nid1P10493 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Nid1P10493 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.14■□□□□ 0.98
Nid1P10493 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Nid1P10493 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nid1P10493 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nid1P10493 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Nid1P10493 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nid1P10493 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nid1P10493 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nid1P10493 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Nid1P10493 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nid1P10493 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Nid1P10493 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Nid1P10493 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Nid1P10493 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nid1P10493 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nid1P10493 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nid1P10493 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nid1P10493 Mir3960-201ENSMUST00000198213 73 ntBASIC21.11■□□□□ 0.97
Nid1P10493 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nid1P10493 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nid1P10493 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nid1P10493 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nid1P10493 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.1■□□□□ 0.97
Nid1P10493 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nid1P10493 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nid1P10493 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.1■□□□□ 0.97
Nid1P10493 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.1■□□□□ 0.97
Nid1P10493 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Nid1P10493 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nid1P10493 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nid1P10493 Gm11599-201ENSMUST00000118720 878 ntBASIC21.09■□□□□ 0.97
Nid1P10493 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.09■□□□□ 0.97
Nid1P10493 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.09■□□□□ 0.97
Nid1P10493 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.09■□□□□ 0.97
Nid1P10493 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nid1P10493 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nid1P10493 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.08■□□□□ 0.97
Nid1P10493 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Nid1P10493 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nid1P10493 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nid1P10493 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.07■□□□□ 0.96
Nid1P10493 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nid1P10493 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nid1P10493 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nid1P10493 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nid1P10493 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Nid1P10493 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nid1P10493 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nid1P10493 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nid1P10493 Gm45364-201ENSMUST00000210883 159 ntBASIC21.05■□□□□ 0.96
Nid1P10493 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nid1P10493 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Nid1P10493 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nid1P10493 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.04■□□□□ 0.96
Nid1P10493 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nid1P10493 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.04■□□□□ 0.96
Nid1P10493 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.03■□□□□ 0.96
Nid1P10493 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Nid1P10493 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nid1P10493 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Nid1P10493 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nid1P10493 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.02■□□□□ 0.96
Nid1P10493 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Nid1P10493 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.02■□□□□ 0.96
Nid1P10493 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Nid1P10493 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nid1P10493 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nid1P10493 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nid1P10493 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Nid1P10493 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.01■□□□□ 0.95
Nid1P10493 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nid1P10493 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21■□□□□ 0.95
Nid1P10493 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nid1P10493 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Nid1P10493 Gm6934-201ENSMUST00000194780 1905 ntBASIC21■□□□□ 0.95
Nid1P10493 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nid1P10493 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nid1P10493 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.99■□□□□ 0.95
Nid1P10493 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nid1P10493 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
Nid1P10493 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Nid1P10493 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nid1P10493 Terc-201ENSMUST00000082862 423 ntBASIC20.98■□□□□ 0.95
Nid1P10493 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nid1P10493 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nid1P10493 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nid1P10493 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Nid1P10493 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nid1P10493 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nid1P10493 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nid1P10493 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms