Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
P04940 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.34■□□□□ 0.53
P04940 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P04940 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.33■□□□□ 0.53
P04940 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
P04940 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.33■□□□□ 0.53
P04940 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
P04940 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
P04940 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P04940 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
P04940 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
P04940 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P04940 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.32■□□□□ 0.52
P04940 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
P04940 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P04940 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04940 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04940 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04940 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P04940 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04940 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04940 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P04940 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.31■□□□□ 0.52
P04940 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
P04940 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04940 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.3■□□□□ 0.52
P04940 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04940 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
P04940 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
P04940 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04940 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04940 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P04940 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
P04940 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
P04940 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
P04940 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.29■□□□□ 0.52
P04940 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
P04940 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
P04940 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
P04940 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
P04940 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04940 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.28■□□□□ 0.52
P04940 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
P04940 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
P04940 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.28■□□□□ 0.52
P04940 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
P04940 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P04940 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.27■□□□□ 0.52
P04940 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P04940 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.27■□□□□ 0.52
P04940 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
P04940 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
P04940 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
P04940 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
P04940 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.26■□□□□ 0.51
P04940 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
P04940 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P04940 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P04940 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P04940 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
P04940 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
P04940 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
P04940 Gm6311-201ENSMUST00000073790 878 ntBASIC18.26■□□□□ 0.51
P04940 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P04940 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P04940 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P04940 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P04940 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.25■□□□□ 0.51
P04940 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P04940 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.25■□□□□ 0.51
P04940 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.25■□□□□ 0.51
P04940 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
P04940 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P04940 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P04940 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.24■□□□□ 0.51
P04940 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.24■□□□□ 0.51
P04940 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P04940 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P04940 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
P04940 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
P04940 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
P04940 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P04940 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04940 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04940 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
P04940 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
P04940 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
P04940 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04940 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04940 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.23■□□□□ 0.51
P04940 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.22■□□□□ 0.51
P04940 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P04940 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
P04940 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
P04940 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P04940 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
P04940 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P04940 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.21■□□□□ 0.51
P04940 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
P04940 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms