Protein–RNA interactions for Protein: O88746

Tom1, Target of Myb protein 1, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tom1O88746 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC31.25■■■□□ 2.59
Tom1O88746 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC31.24■■■□□ 2.59
Tom1O88746 Slc35b2-207ENSMUST00000226086 850 ntBASIC31.24■■■□□ 2.59
Tom1O88746 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
Tom1O88746 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC31.23■■■□□ 2.59
Tom1O88746 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Tom1O88746 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC31.22■■■□□ 2.59
Tom1O88746 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Tom1O88746 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Tom1O88746 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC31.21■■■□□ 2.59
Tom1O88746 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Tom1O88746 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Tom1O88746 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
Tom1O88746 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC31.19■■■□□ 2.58
Tom1O88746 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Tom1O88746 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Tom1O88746 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
Tom1O88746 Gm9847-201ENSMUST00000052528 599 ntBASIC31.18■■■□□ 2.58
Tom1O88746 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Tom1O88746 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Tom1O88746 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Tom1O88746 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Tom1O88746 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Tom1O88746 Gm21956-201ENSMUST00000179946 522 ntBASIC31.15■■■□□ 2.58
Tom1O88746 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
Tom1O88746 Gm5131-201ENSMUST00000212776 1238 ntBASIC31.14■■■□□ 2.58
Tom1O88746 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Tom1O88746 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
Tom1O88746 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
Tom1O88746 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC31.13■■■□□ 2.57
Tom1O88746 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC31.13■■■□□ 2.57
Tom1O88746 AC117769.4-201ENSMUST00000225679 685 ntBASIC31.12■■■□□ 2.57
Tom1O88746 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Tom1O88746 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Tom1O88746 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Tom1O88746 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Tom1O88746 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
Tom1O88746 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Tom1O88746 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Tom1O88746 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC31.08■■■□□ 2.57
Tom1O88746 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Tom1O88746 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
Tom1O88746 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
Tom1O88746 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Tom1O88746 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Tom1O88746 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Tom1O88746 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Tom1O88746 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
Tom1O88746 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC31.06■■■□□ 2.56
Tom1O88746 Gm7417-201ENSMUST00000192950 473 ntBASIC31.06■■■□□ 2.56
Tom1O88746 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Tom1O88746 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
Tom1O88746 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Tom1O88746 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Tom1O88746 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC31.04■■■□□ 2.56
Tom1O88746 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Tom1O88746 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Tom1O88746 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Tom1O88746 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Tom1O88746 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Tom1O88746 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC31.03■■■□□ 2.56
Tom1O88746 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC31.03■■■□□ 2.56
Tom1O88746 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.03■■■□□ 2.56
Tom1O88746 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Tom1O88746 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Tom1O88746 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Tom1O88746 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Tom1O88746 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
Tom1O88746 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC31■■■□□ 2.55
Tom1O88746 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Tom1O88746 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
Tom1O88746 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Tom1O88746 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC30.99■■■□□ 2.55
Tom1O88746 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC30.98■■■□□ 2.55
Tom1O88746 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Tom1O88746 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
Tom1O88746 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Tom1O88746 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC30.97■■■□□ 2.55
Tom1O88746 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC30.97■■■□□ 2.55
Tom1O88746 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Tom1O88746 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Tom1O88746 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
Tom1O88746 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
Tom1O88746 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC30.96■■■□□ 2.55
Tom1O88746 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Tom1O88746 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.54
Tom1O88746 Gm14121-201ENSMUST00000121441 1380 ntBASIC30.94■■■□□ 2.54
Tom1O88746 Flvcr1-202ENSMUST00000191946 1216 ntBASIC30.94■■■□□ 2.54
Tom1O88746 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Tom1O88746 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Tom1O88746 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Tom1O88746 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Tom1O88746 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Tom1O88746 Appbp2os-202ENSMUST00000206972 447 ntBASIC30.93■■■□□ 2.54
Tom1O88746 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Tom1O88746 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Tom1O88746 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC30.91■■■□□ 2.54
Tom1O88746 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
Tom1O88746 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Tom1O88746 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms