Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh12O55134 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh12O55134 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh12O55134 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh12O55134 Gm9812-201ENSMUST00000061934 968 ntBASIC20.29■□□□□ 0.84
Pcdh12O55134 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh12O55134 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh12O55134 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh12O55134 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh12O55134 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdh12O55134 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdh12O55134 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh12O55134 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
Pcdh12O55134 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh12O55134 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh12O55134 Gm11175-201ENSMUST00000116172 543 ntBASIC20.27■□□□□ 0.84
Pcdh12O55134 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh12O55134 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh12O55134 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh12O55134 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh12O55134 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh12O55134 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh12O55134 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh12O55134 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh12O55134 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh12O55134 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pcdh12O55134 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh12O55134 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh12O55134 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdh12O55134 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.25■□□□□ 0.83
Pcdh12O55134 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh12O55134 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh12O55134 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.24■□□□□ 0.83
Pcdh12O55134 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh12O55134 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdh12O55134 Mir6538-201ENSMUST00000183713 110 ntBASIC20.24■□□□□ 0.83
Pcdh12O55134 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh12O55134 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.24■□□□□ 0.83
Pcdh12O55134 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.24■□□□□ 0.83
Pcdh12O55134 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Pcdh12O55134 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Pcdh12O55134 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh12O55134 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh12O55134 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.23■□□□□ 0.83
Pcdh12O55134 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh12O55134 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh12O55134 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcdh12O55134 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh12O55134 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh12O55134 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh12O55134 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh12O55134 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh12O55134 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcdh12O55134 Scarna2-201ENSMUST00000157560 414 ntBASIC20.22■□□□□ 0.83
Pcdh12O55134 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh12O55134 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh12O55134 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh12O55134 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcdh12O55134 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh12O55134 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh12O55134 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh12O55134 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Pcdh12O55134 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Pcdh12O55134 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pcdh12O55134 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Pcdh12O55134 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh12O55134 Gm9806-201ENSMUST00000051080 552 ntBASIC20.2■□□□□ 0.82
Pcdh12O55134 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh12O55134 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Pcdh12O55134 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh12O55134 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.19■□□□□ 0.82
Pcdh12O55134 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh12O55134 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh12O55134 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh12O55134 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh12O55134 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh12O55134 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.18■□□□□ 0.82
Pcdh12O55134 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh12O55134 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Pcdh12O55134 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh12O55134 Gm11687-201ENSMUST00000118911 886 ntBASIC20.17■□□□□ 0.82
Pcdh12O55134 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh12O55134 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcdh12O55134 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcdh12O55134 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Pcdh12O55134 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcdh12O55134 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh12O55134 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh12O55134 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh12O55134 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh12O55134 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh12O55134 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Pcdh12O55134 Gm16437-201ENSMUST00000025669 507 ntBASIC20.14■□□□□ 0.81
Pcdh12O55134 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Pcdh12O55134 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Pcdh12O55134 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh12O55134 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh12O55134 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh12O55134 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcdh12O55134 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 118.8 ms