Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cntnap1O54991 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cntnap1O54991 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cntnap1O54991 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Cntnap1O54991 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC30.64■■■□□ 2.5
Cntnap1O54991 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Cntnap1O54991 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Cntnap1O54991 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Cntnap1O54991 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC30.63■■■□□ 2.49
Cntnap1O54991 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC30.63■■■□□ 2.49
Cntnap1O54991 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cntnap1O54991 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
Cntnap1O54991 Gm5131-201ENSMUST00000212776 1238 ntBASIC30.61■■■□□ 2.49
Cntnap1O54991 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
Cntnap1O54991 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Cntnap1O54991 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC30.61■■■□□ 2.49
Cntnap1O54991 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Cntnap1O54991 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC30.6■■■□□ 2.49
Cntnap1O54991 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Cntnap1O54991 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cntnap1O54991 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Cntnap1O54991 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC30.59■■■□□ 2.49
Cntnap1O54991 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cntnap1O54991 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
Cntnap1O54991 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cntnap1O54991 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC30.57■■■□□ 2.48
Cntnap1O54991 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Cntnap1O54991 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Cntnap1O54991 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Cntnap1O54991 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC30.56■■■□□ 2.48
Cntnap1O54991 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Cntnap1O54991 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC30.56■■■□□ 2.48
Cntnap1O54991 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Cntnap1O54991 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Cntnap1O54991 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC30.54■■■□□ 2.48
Cntnap1O54991 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
Cntnap1O54991 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC30.54■■■□□ 2.48
Cntnap1O54991 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC30.54■■■□□ 2.48
Cntnap1O54991 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Cntnap1O54991 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Cntnap1O54991 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Cntnap1O54991 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Cntnap1O54991 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Cntnap1O54991 Gm9847-201ENSMUST00000052528 599 ntBASIC30.52■■■□□ 2.48
Cntnap1O54991 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Cntnap1O54991 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.48
Cntnap1O54991 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
Cntnap1O54991 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Cntnap1O54991 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
Cntnap1O54991 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Cntnap1O54991 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Cntnap1O54991 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Cntnap1O54991 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Cntnap1O54991 Gm14121-201ENSMUST00000121441 1380 ntBASIC30.46■■■□□ 2.47
Cntnap1O54991 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.47
Cntnap1O54991 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Cntnap1O54991 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC30.45■■■□□ 2.47
Cntnap1O54991 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Cntnap1O54991 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Cntnap1O54991 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Cntnap1O54991 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Cntnap1O54991 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Cntnap1O54991 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC30.44■■■□□ 2.46
Cntnap1O54991 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Cntnap1O54991 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.43■■■□□ 2.46
Cntnap1O54991 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Cntnap1O54991 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Cntnap1O54991 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC30.42■■■□□ 2.46
Cntnap1O54991 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Cntnap1O54991 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Cntnap1O54991 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Cntnap1O54991 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
Cntnap1O54991 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Cntnap1O54991 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Cntnap1O54991 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Cntnap1O54991 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
Cntnap1O54991 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Cntnap1O54991 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC30.4■■■□□ 2.46
Cntnap1O54991 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Cntnap1O54991 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Cntnap1O54991 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Cntnap1O54991 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
Cntnap1O54991 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC30.38■■■□□ 2.45
Cntnap1O54991 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Cntnap1O54991 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC30.37■■■□□ 2.45
Cntnap1O54991 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
Cntnap1O54991 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Cntnap1O54991 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC30.36■■■□□ 2.45
Cntnap1O54991 AC117769.4-201ENSMUST00000225679 685 ntBASIC30.36■■■□□ 2.45
Cntnap1O54991 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC30.35■■■□□ 2.45
Cntnap1O54991 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC30.35■■■□□ 2.45
Cntnap1O54991 Gm7417-201ENSMUST00000192950 473 ntBASIC30.35■■■□□ 2.45
Cntnap1O54991 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Cntnap1O54991 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Cntnap1O54991 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Cntnap1O54991 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Cntnap1O54991 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC30.31■■■□□ 2.44
Cntnap1O54991 Appbp2os-202ENSMUST00000206972 447 ntBASIC30.31■■■□□ 2.44
Cntnap1O54991 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Cntnap1O54991 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms