Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.24■■□□□ 1.47
Nr1i3O35627 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.24■■□□□ 1.47
Nr1i3O35627 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Nr1i3O35627 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Nr1i3O35627 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC24.24■■□□□ 1.47
Nr1i3O35627 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Nr1i3O35627 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.23■■□□□ 1.47
Nr1i3O35627 Gm4799-201ENSMUST00000095396 657 ntBASIC24.23■■□□□ 1.47
Nr1i3O35627 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Nr1i3O35627 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Nr1i3O35627 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Nr1i3O35627 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Nr1i3O35627 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Nr1i3O35627 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Nr1i3O35627 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Nr1i3O35627 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Nr1i3O35627 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Nr1i3O35627 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Nr1i3O35627 Gm9812-201ENSMUST00000061934 968 ntBASIC24.21■■□□□ 1.47
Nr1i3O35627 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Nr1i3O35627 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.21■■□□□ 1.47
Nr1i3O35627 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Nr1i3O35627 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Nr1i3O35627 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Nr1i3O35627 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Nr1i3O35627 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Nr1i3O35627 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.19■■□□□ 1.46
Nr1i3O35627 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Nr1i3O35627 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Nr1i3O35627 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Nr1i3O35627 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Nr1i3O35627 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Nr1i3O35627 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Nr1i3O35627 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
Nr1i3O35627 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Nr1i3O35627 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Nr1i3O35627 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Nr1i3O35627 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Nr1i3O35627 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.16■■□□□ 1.46
Nr1i3O35627 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Nr1i3O35627 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Nr1i3O35627 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Nr1i3O35627 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Nr1i3O35627 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.14■■□□□ 1.45
Nr1i3O35627 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.13■■□□□ 1.45
Nr1i3O35627 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.13■■□□□ 1.45
Nr1i3O35627 Gm17641-201ENSMUST00000166328 2350 ntBASIC24.13■■□□□ 1.45
Nr1i3O35627 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Nr1i3O35627 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Nr1i3O35627 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Nr1i3O35627 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.13■■□□□ 1.45
Nr1i3O35627 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Nr1i3O35627 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Nr1i3O35627 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Nr1i3O35627 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.12■■□□□ 1.45
Nr1i3O35627 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
Nr1i3O35627 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.12■■□□□ 1.45
Nr1i3O35627 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Nr1i3O35627 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC24.12■■□□□ 1.45
Nr1i3O35627 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Nr1i3O35627 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.11■■□□□ 1.45
Nr1i3O35627 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Nr1i3O35627 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Nr1i3O35627 Gm7432-201ENSMUST00000210343 879 ntBASIC24.11■■□□□ 1.45
Nr1i3O35627 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Nr1i3O35627 Gm6934-201ENSMUST00000194780 1905 ntBASIC24.11■■□□□ 1.45
Nr1i3O35627 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Nr1i3O35627 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.1■■□□□ 1.45
Nr1i3O35627 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Nr1i3O35627 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Nr1i3O35627 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Nr1i3O35627 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Nr1i3O35627 Mir3960-201ENSMUST00000198213 73 ntBASIC24.1■■□□□ 1.45
Nr1i3O35627 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Nr1i3O35627 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.1■■□□□ 1.45
Nr1i3O35627 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Nr1i3O35627 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Nr1i3O35627 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
Nr1i3O35627 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Nr1i3O35627 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Nr1i3O35627 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.09■■□□□ 1.45
Nr1i3O35627 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.09■■□□□ 1.45
Nr1i3O35627 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Nr1i3O35627 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Nr1i3O35627 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Nr1i3O35627 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Nr1i3O35627 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Nr1i3O35627 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.08■■□□□ 1.44
Nr1i3O35627 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC24.07■■□□□ 1.44
Nr1i3O35627 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Nr1i3O35627 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Nr1i3O35627 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Nr1i3O35627 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Nr1i3O35627 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Nr1i3O35627 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.05■■□□□ 1.44
Nr1i3O35627 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Nr1i3O35627 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Nr1i3O35627 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Nr1i3O35627 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.05■■□□□ 1.44
Nr1i3O35627 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms