Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atf6bO35451 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Atf6bO35451 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atf6bO35451 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.32■□□□□ 0.68
Atf6bO35451 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
Atf6bO35451 Gm9806-201ENSMUST00000051080 552 ntBASIC19.32■□□□□ 0.68
Atf6bO35451 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Atf6bO35451 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Atf6bO35451 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Atf6bO35451 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atf6bO35451 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atf6bO35451 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atf6bO35451 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atf6bO35451 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atf6bO35451 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Atf6bO35451 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf6bO35451 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf6bO35451 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf6bO35451 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf6bO35451 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Atf6bO35451 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Atf6bO35451 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atf6bO35451 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atf6bO35451 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf6bO35451 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf6bO35451 Mir6538-201ENSMUST00000183713 110 ntBASIC19.29■□□□□ 0.68
Atf6bO35451 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Atf6bO35451 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf6bO35451 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf6bO35451 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf6bO35451 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Atf6bO35451 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf6bO35451 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atf6bO35451 Gm11687-201ENSMUST00000118911 886 ntBASIC19.28■□□□□ 0.68
Atf6bO35451 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf6bO35451 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf6bO35451 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Atf6bO35451 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atf6bO35451 Gm16437-201ENSMUST00000025669 507 ntBASIC19.27■□□□□ 0.68
Atf6bO35451 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atf6bO35451 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atf6bO35451 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atf6bO35451 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Atf6bO35451 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.25■□□□□ 0.67
Atf6bO35451 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf6bO35451 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf6bO35451 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atf6bO35451 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf6bO35451 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.25■□□□□ 0.67
Atf6bO35451 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atf6bO35451 Terc-201ENSMUST00000082862 423 ntBASIC19.25■□□□□ 0.67
Atf6bO35451 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atf6bO35451 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf6bO35451 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf6bO35451 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Atf6bO35451 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Atf6bO35451 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Atf6bO35451 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf6bO35451 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf6bO35451 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Atf6bO35451 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Atf6bO35451 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Atf6bO35451 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf6bO35451 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf6bO35451 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.22■□□□□ 0.67
Atf6bO35451 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Atf6bO35451 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf6bO35451 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf6bO35451 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atf6bO35451 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf6bO35451 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
Atf6bO35451 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Atf6bO35451 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf6bO35451 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Atf6bO35451 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf6bO35451 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf6bO35451 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.2■□□□□ 0.66
Atf6bO35451 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6bO35451 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6bO35451 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6bO35451 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.2■□□□□ 0.66
Atf6bO35451 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6bO35451 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6bO35451 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.2■□□□□ 0.66
Atf6bO35451 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6bO35451 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6bO35451 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf6bO35451 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf6bO35451 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Atf6bO35451 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf6bO35451 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atf6bO35451 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf6bO35451 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf6bO35451 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf6bO35451 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Atf6bO35451 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf6bO35451 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atf6bO35451 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf6bO35451 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf6bO35451 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms