Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ercc2O08811 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.09■■□□□ 1.29
Ercc2O08811 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ercc2O08811 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ercc2O08811 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.09■■□□□ 1.29
Ercc2O08811 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ercc2O08811 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ercc2O08811 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ercc2O08811 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ercc2O08811 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
Ercc2O08811 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.08■■□□□ 1.28
Ercc2O08811 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Ercc2O08811 Scarna2-201ENSMUST00000157560 414 ntBASIC23.07■■□□□ 1.28
Ercc2O08811 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ercc2O08811 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
Ercc2O08811 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Ercc2O08811 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ercc2O08811 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ercc2O08811 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ercc2O08811 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ercc2O08811 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.05■■□□□ 1.28
Ercc2O08811 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ercc2O08811 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ercc2O08811 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ercc2O08811 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Ercc2O08811 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ercc2O08811 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ercc2O08811 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ercc2O08811 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ercc2O08811 Gm9806-201ENSMUST00000051080 552 ntBASIC23.03■■□□□ 1.28
Ercc2O08811 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ercc2O08811 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ercc2O08811 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ercc2O08811 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.02■■□□□ 1.28
Ercc2O08811 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.02■■□□□ 1.28
Ercc2O08811 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
Ercc2O08811 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ercc2O08811 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ercc2O08811 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ercc2O08811 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.01■■□□□ 1.27
Ercc2O08811 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ercc2O08811 Gm16437-201ENSMUST00000025669 507 ntBASIC23.01■■□□□ 1.27
Ercc2O08811 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ercc2O08811 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ercc2O08811 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.01■■□□□ 1.27
Ercc2O08811 Il17rd-202ENSMUST00000223942 2186 ntBASIC23■■□□□ 1.27
Ercc2O08811 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ercc2O08811 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23■■□□□ 1.27
Ercc2O08811 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ercc2O08811 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ercc2O08811 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ercc2O08811 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ercc2O08811 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ercc2O08811 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.99■■□□□ 1.27
Ercc2O08811 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ercc2O08811 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ercc2O08811 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Ercc2O08811 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ercc2O08811 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ercc2O08811 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ercc2O08811 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.97■■□□□ 1.27
Ercc2O08811 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ercc2O08811 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ercc2O08811 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.97■■□□□ 1.27
Ercc2O08811 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ercc2O08811 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ercc2O08811 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ercc2O08811 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ercc2O08811 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ercc2O08811 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ercc2O08811 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Ercc2O08811 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.96■■□□□ 1.27
Ercc2O08811 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ercc2O08811 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ercc2O08811 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ercc2O08811 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ercc2O08811 Gm11175-201ENSMUST00000116172 543 ntBASIC22.95■■□□□ 1.26
Ercc2O08811 Gm11687-201ENSMUST00000118911 886 ntBASIC22.95■■□□□ 1.26
Ercc2O08811 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Ercc2O08811 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ercc2O08811 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ercc2O08811 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ercc2O08811 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ercc2O08811 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.94■■□□□ 1.26
Ercc2O08811 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ercc2O08811 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ercc2O08811 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ercc2O08811 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ercc2O08811 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ercc2O08811 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.94■■□□□ 1.26
Ercc2O08811 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.93■■□□□ 1.26
Ercc2O08811 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ercc2O08811 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ercc2O08811 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ercc2O08811 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ercc2O08811 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ercc2O08811 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.91■■□□□ 1.26
Ercc2O08811 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ercc2O08811 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Ercc2O08811 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms