Protein–RNA interactions for Protein: F6R3J9

Gm8879, Predicted gene 8879, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm8879F6R3J9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Gm8879F6R3J9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm8879F6R3J9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Gm8879F6R3J9 Gm37136-201ENSMUST00000194368 194 ntBASIC21.39■■□□□ 1.01
Gm8879F6R3J9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.39■■□□□ 1.01
Gm8879F6R3J9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm8879F6R3J9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm8879F6R3J9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm8879F6R3J9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm8879F6R3J9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm8879F6R3J9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm8879F6R3J9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm8879F6R3J9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm8879F6R3J9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.37■■□□□ 1.01
Gm8879F6R3J9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.37■■□□□ 1.01
Gm8879F6R3J9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Gm8879F6R3J9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm8879F6R3J9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm8879F6R3J9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Gm8879F6R3J9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.36■■□□□ 1.01
Gm8879F6R3J9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm8879F6R3J9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gm8879F6R3J9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm8879F6R3J9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Gm8879F6R3J9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm8879F6R3J9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gm8879F6R3J9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm8879F6R3J9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Gm8879F6R3J9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm8879F6R3J9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm8879F6R3J9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Gm8879F6R3J9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
Gm8879F6R3J9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Gm8879F6R3J9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.33■■□□□ 1.01
Gm8879F6R3J9 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.33■■□□□ 1.01
Gm8879F6R3J9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
Gm8879F6R3J9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.33■■□□□ 1
Gm8879F6R3J9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.33■■□□□ 1
Gm8879F6R3J9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm8879F6R3J9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm8879F6R3J9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm8879F6R3J9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.31■■□□□ 1
Gm8879F6R3J9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.31■■□□□ 1
Gm8879F6R3J9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.31■■□□□ 1
Gm8879F6R3J9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm8879F6R3J9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.3■■□□□ 1
Gm8879F6R3J9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm8879F6R3J9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Gm8879F6R3J9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
Gm8879F6R3J9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.29■■□□□ 1
Gm8879F6R3J9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm8879F6R3J9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.29■■□□□ 1
Gm8879F6R3J9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Gm8879F6R3J9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm8879F6R3J9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm8879F6R3J9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm8879F6R3J9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.28■■□□□ 1
Gm8879F6R3J9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gm8879F6R3J9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.28■■□□□ 1
Gm8879F6R3J9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm8879F6R3J9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Gm8879F6R3J9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Gm8879F6R3J9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm8879F6R3J9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Gm8879F6R3J9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Gm8879F6R3J9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Gm8879F6R3J9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Gm8879F6R3J9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.26■□□□□ 0.99
Gm8879F6R3J9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.26■□□□□ 0.99
Gm8879F6R3J9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Gm8879F6R3J9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm8879F6R3J9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Gm8879F6R3J9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm8879F6R3J9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Gm8879F6R3J9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm8879F6R3J9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm8879F6R3J9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm8879F6R3J9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.24■□□□□ 0.99
Gm8879F6R3J9 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.24■□□□□ 0.99
Gm8879F6R3J9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm8879F6R3J9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm8879F6R3J9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm8879F6R3J9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm8879F6R3J9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm8879F6R3J9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm8879F6R3J9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm8879F6R3J9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm8879F6R3J9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm8879F6R3J9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm8879F6R3J9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm8879F6R3J9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gm8879F6R3J9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Gm8879F6R3J9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm8879F6R3J9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Gm8879F6R3J9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.2■□□□□ 0.98
Gm8879F6R3J9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm8879F6R3J9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm8879F6R3J9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm8879F6R3J9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Gm8879F6R3J9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms