Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC35.18■■■■□ 3.22
Ccdc141E9Q8Q6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Ccdc141E9Q8Q6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
Ccdc141E9Q8Q6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Ccdc141E9Q8Q6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC35.16■■■■□ 3.22
Ccdc141E9Q8Q6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Ccdc141E9Q8Q6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC35.15■■■■□ 3.22
Ccdc141E9Q8Q6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
Ccdc141E9Q8Q6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Ccdc141E9Q8Q6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
Ccdc141E9Q8Q6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC35.13■■■■□ 3.21
Ccdc141E9Q8Q6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC35.13■■■■□ 3.21
Ccdc141E9Q8Q6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC35.13■■■■□ 3.21
Ccdc141E9Q8Q6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC35.12■■■■□ 3.21
Ccdc141E9Q8Q6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Ccdc141E9Q8Q6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
Ccdc141E9Q8Q6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Ccdc141E9Q8Q6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC35.11■■■■□ 3.21
Ccdc141E9Q8Q6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC35.11■■■■□ 3.21
Ccdc141E9Q8Q6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC35.11■■■■□ 3.21
Ccdc141E9Q8Q6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
Ccdc141E9Q8Q6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
Ccdc141E9Q8Q6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
Ccdc141E9Q8Q6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC35.08■■■■□ 3.21
Ccdc141E9Q8Q6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC35.08■■■■□ 3.21
Ccdc141E9Q8Q6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Ccdc141E9Q8Q6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC35.07■■■■□ 3.21
Ccdc141E9Q8Q6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC35.07■■■■□ 3.21
Ccdc141E9Q8Q6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Ccdc141E9Q8Q6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC35.06■■■■□ 3.2
Ccdc141E9Q8Q6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC35.06■■■■□ 3.2
Ccdc141E9Q8Q6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Ccdc141E9Q8Q6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Ccdc141E9Q8Q6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC35.05■■■■□ 3.2
Ccdc141E9Q8Q6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Ccdc141E9Q8Q6 Gm9959-201ENSMUST00000068277 390 ntBASIC35.05■■■■□ 3.2
Ccdc141E9Q8Q6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Ccdc141E9Q8Q6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC35.04■■■■□ 3.2
Ccdc141E9Q8Q6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC35.02■■■■□ 3.2
Ccdc141E9Q8Q6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC35.01■■■■□ 3.2
Ccdc141E9Q8Q6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
Ccdc141E9Q8Q6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
Ccdc141E9Q8Q6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC35■■■■□ 3.19
Ccdc141E9Q8Q6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Ccdc141E9Q8Q6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC35■■■■□ 3.19
Ccdc141E9Q8Q6 Gm42501-201ENSMUST00000200220 1026 ntBASIC35■■■■□ 3.19
Ccdc141E9Q8Q6 Gm18755-201ENSMUST00000218030 1099 ntBASIC34.99■■■■□ 3.19
Ccdc141E9Q8Q6 AC117769.4-201ENSMUST00000225679 685 ntBASIC34.99■■■■□ 3.19
Ccdc141E9Q8Q6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC34.99■■■■□ 3.19
Ccdc141E9Q8Q6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC34.99■■■■□ 3.19
Ccdc141E9Q8Q6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
Ccdc141E9Q8Q6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC34.98■■■■□ 3.19
Ccdc141E9Q8Q6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC34.98■■■■□ 3.19
Ccdc141E9Q8Q6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Ccdc141E9Q8Q6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC34.96■■■■□ 3.19
Ccdc141E9Q8Q6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Ccdc141E9Q8Q6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Ccdc141E9Q8Q6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC34.95■■■■□ 3.19
Ccdc141E9Q8Q6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC34.95■■■■□ 3.18
Ccdc141E9Q8Q6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Ccdc141E9Q8Q6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC34.94■■■■□ 3.18
Ccdc141E9Q8Q6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Ccdc141E9Q8Q6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Ccdc141E9Q8Q6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC34.92■■■■□ 3.18
Ccdc141E9Q8Q6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC34.92■■■■□ 3.18
Ccdc141E9Q8Q6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
Ccdc141E9Q8Q6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Ccdc141E9Q8Q6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC34.91■■■■□ 3.18
Ccdc141E9Q8Q6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC34.91■■■■□ 3.18
Ccdc141E9Q8Q6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Ccdc141E9Q8Q6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC34.91■■■■□ 3.18
Ccdc141E9Q8Q6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Ccdc141E9Q8Q6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC34.89■■■■□ 3.18
Ccdc141E9Q8Q6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC34.89■■■■□ 3.18
Ccdc141E9Q8Q6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC34.89■■■■□ 3.18
Ccdc141E9Q8Q6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC34.89■■■■□ 3.18
Ccdc141E9Q8Q6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC34.88■■■■□ 3.17
Ccdc141E9Q8Q6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Ccdc141E9Q8Q6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Ccdc141E9Q8Q6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC34.87■■■■□ 3.17
Ccdc141E9Q8Q6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC34.87■■■■□ 3.17
Ccdc141E9Q8Q6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Ccdc141E9Q8Q6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Ccdc141E9Q8Q6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
Ccdc141E9Q8Q6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Ccdc141E9Q8Q6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC34.85■■■■□ 3.17
Ccdc141E9Q8Q6 Gm6206-201ENSMUST00000133472 2199 ntBASIC34.84■■■■□ 3.17
Ccdc141E9Q8Q6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
Ccdc141E9Q8Q6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC34.83■■■■□ 3.17
Ccdc141E9Q8Q6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Ccdc141E9Q8Q6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Ccdc141E9Q8Q6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC34.82■■■■□ 3.17
Ccdc141E9Q8Q6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC34.82■■■■□ 3.16
Ccdc141E9Q8Q6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Ccdc141E9Q8Q6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Ccdc141E9Q8Q6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC34.81■■■■□ 3.16
Ccdc141E9Q8Q6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
Ccdc141E9Q8Q6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Ccdc141E9Q8Q6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
Ccdc141E9Q8Q6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Retrieved 100 of 76,532 protein–RNA pairs in 470.5 ms