Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shank1D3YZU1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.37■□□□□ 0.85
Shank1D3YZU1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Shank1D3YZU1 Amer2-203ENSMUST00000225247 2662 ntBASIC20.35■□□□□ 0.85
Shank1D3YZU1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shank1D3YZU1 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.35■□□□□ 0.85
Shank1D3YZU1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.35■□□□□ 0.85
Shank1D3YZU1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.35■□□□□ 0.85
Shank1D3YZU1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shank1D3YZU1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Shank1D3YZU1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.35■□□□□ 0.85
Shank1D3YZU1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Shank1D3YZU1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shank1D3YZU1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.34■□□□□ 0.85
Shank1D3YZU1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shank1D3YZU1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Shank1D3YZU1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Shank1D3YZU1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shank1D3YZU1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Shank1D3YZU1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shank1D3YZU1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shank1D3YZU1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shank1D3YZU1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.32■□□□□ 0.84
Shank1D3YZU1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shank1D3YZU1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.31■□□□□ 0.84
Shank1D3YZU1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shank1D3YZU1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shank1D3YZU1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shank1D3YZU1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shank1D3YZU1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Shank1D3YZU1 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.3■□□□□ 0.84
Shank1D3YZU1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shank1D3YZU1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Shank1D3YZU1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
Shank1D3YZU1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.28■□□□□ 0.84
Shank1D3YZU1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shank1D3YZU1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shank1D3YZU1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shank1D3YZU1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shank1D3YZU1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Shank1D3YZU1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shank1D3YZU1 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.25■□□□□ 0.83
Shank1D3YZU1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shank1D3YZU1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Shank1D3YZU1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Shank1D3YZU1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.25■□□□□ 0.83
Shank1D3YZU1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.25■□□□□ 0.83
Shank1D3YZU1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Shank1D3YZU1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shank1D3YZU1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.24■□□□□ 0.83
Shank1D3YZU1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank1D3YZU1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank1D3YZU1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shank1D3YZU1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shank1D3YZU1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Shank1D3YZU1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.23■□□□□ 0.83
Shank1D3YZU1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.22■□□□□ 0.83
Shank1D3YZU1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shank1D3YZU1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shank1D3YZU1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shank1D3YZU1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shank1D3YZU1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shank1D3YZU1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank1D3YZU1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank1D3YZU1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.21■□□□□ 0.83
Shank1D3YZU1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.2■□□□□ 0.82
Shank1D3YZU1 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.2■□□□□ 0.82
Shank1D3YZU1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shank1D3YZU1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.19■□□□□ 0.82
Shank1D3YZU1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Shank1D3YZU1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shank1D3YZU1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Shank1D3YZU1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Shank1D3YZU1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Shank1D3YZU1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Shank1D3YZU1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Shank1D3YZU1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.17■□□□□ 0.82
Shank1D3YZU1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Shank1D3YZU1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Shank1D3YZU1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Shank1D3YZU1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Shank1D3YZU1 Gm10232-201ENSMUST00000089221 720 ntBASIC20.17■□□□□ 0.82
Shank1D3YZU1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shank1D3YZU1 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.16■□□□□ 0.82
Shank1D3YZU1 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.16■□□□□ 0.82
Shank1D3YZU1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shank1D3YZU1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shank1D3YZU1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Shank1D3YZU1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shank1D3YZU1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shank1D3YZU1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Shank1D3YZU1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shank1D3YZU1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.15■□□□□ 0.82
Shank1D3YZU1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.15■□□□□ 0.82
Shank1D3YZU1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Shank1D3YZU1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Shank1D3YZU1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Shank1D3YZU1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Shank1D3YZU1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Shank1D3YZU1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms