Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Chd6A3KFM7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd6A3KFM7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd6A3KFM7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chd6A3KFM7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Chd6A3KFM7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd6A3KFM7 Gm12821-201ENSMUST00000120022 600 ntBASIC19.01■□□□□ 0.63
Chd6A3KFM7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd6A3KFM7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd6A3KFM7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chd6A3KFM7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19■□□□□ 0.63
Chd6A3KFM7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Chd6A3KFM7 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19■□□□□ 0.63
Chd6A3KFM7 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd6A3KFM7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd6A3KFM7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd6A3KFM7 Gm27011-201ENSMUST00000182352 972 ntBASIC19■□□□□ 0.63
Chd6A3KFM7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd6A3KFM7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd6A3KFM7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd6A3KFM7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Chd6A3KFM7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
Chd6A3KFM7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chd6A3KFM7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Chd6A3KFM7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chd6A3KFM7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chd6A3KFM7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Chd6A3KFM7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chd6A3KFM7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd6A3KFM7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Chd6A3KFM7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chd6A3KFM7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.97■□□□□ 0.63
Chd6A3KFM7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.96■□□□□ 0.63
Chd6A3KFM7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.96■□□□□ 0.63
Chd6A3KFM7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd6A3KFM7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd6A3KFM7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Chd6A3KFM7 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.95■□□□□ 0.62
Chd6A3KFM7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chd6A3KFM7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chd6A3KFM7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.95■□□□□ 0.62
Chd6A3KFM7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd6A3KFM7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd6A3KFM7 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd6A3KFM7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chd6A3KFM7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chd6A3KFM7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Chd6A3KFM7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.94■□□□□ 0.62
Chd6A3KFM7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd6A3KFM7 Gm12922-201ENSMUST00000120626 809 ntBASIC18.93■□□□□ 0.62
Chd6A3KFM7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chd6A3KFM7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chd6A3KFM7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd6A3KFM7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Chd6A3KFM7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd6A3KFM7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd6A3KFM7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.92■□□□□ 0.62
Chd6A3KFM7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd6A3KFM7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd6A3KFM7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chd6A3KFM7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chd6A3KFM7 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.91■□□□□ 0.62
Chd6A3KFM7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.91■□□□□ 0.62
Chd6A3KFM7 Gm7417-201ENSMUST00000192950 473 ntBASIC18.9■□□□□ 0.62
Chd6A3KFM7 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd6A3KFM7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd6A3KFM7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.9■□□□□ 0.62
Chd6A3KFM7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd6A3KFM7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
Chd6A3KFM7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd6A3KFM7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Chd6A3KFM7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd6A3KFM7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Chd6A3KFM7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd6A3KFM7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd6A3KFM7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
Chd6A3KFM7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Chd6A3KFM7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.87■□□□□ 0.61
Chd6A3KFM7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd6A3KFM7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.87■□□□□ 0.61
Chd6A3KFM7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Chd6A3KFM7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd6A3KFM7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd6A3KFM7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chd6A3KFM7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.87■□□□□ 0.61
Chd6A3KFM7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd6A3KFM7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Chd6A3KFM7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.86■□□□□ 0.61
Chd6A3KFM7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd6A3KFM7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.86■□□□□ 0.61
Chd6A3KFM7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd6A3KFM7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Chd6A3KFM7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd6A3KFM7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd6A3KFM7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chd6A3KFM7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.85■□□□□ 0.61
Chd6A3KFM7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd6A3KFM7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Chd6A3KFM7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Chd6A3KFM7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms