Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr4A2AN08 Gm2011-201ENSMUST00000203124 1263 ntBASIC12.53□□□□□ -0.4
Ubr4A2AN08 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.53□□□□□ -0.4
Ubr4A2AN08 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC12.53□□□□□ -0.4
Ubr4A2AN08 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubr4A2AN08 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ubr4A2AN08 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC12.53□□□□□ -0.4
Ubr4A2AN08 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC12.52□□□□□ -0.41
Ubr4A2AN08 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubr4A2AN08 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubr4A2AN08 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubr4A2AN08 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubr4A2AN08 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.51□□□□□ -0.41
Ubr4A2AN08 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubr4A2AN08 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Ubr4A2AN08 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC12.51□□□□□ -0.41
Ubr4A2AN08 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubr4A2AN08 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubr4A2AN08 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubr4A2AN08 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ubr4A2AN08 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubr4A2AN08 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ubr4A2AN08 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ubr4A2AN08 Gm5131-201ENSMUST00000212776 1238 ntBASIC12.5□□□□□ -0.41
Ubr4A2AN08 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubr4A2AN08 Gm43592-201ENSMUST00000196922 1165 ntBASIC12.5□□□□□ -0.41
Ubr4A2AN08 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.49□□□□□ -0.41
Ubr4A2AN08 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubr4A2AN08 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC12.49□□□□□ -0.41
Ubr4A2AN08 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ubr4A2AN08 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ubr4A2AN08 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubr4A2AN08 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ubr4A2AN08 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC12.49□□□□□ -0.41
Ubr4A2AN08 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ubr4A2AN08 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ubr4A2AN08 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.48□□□□□ -0.41
Ubr4A2AN08 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubr4A2AN08 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ubr4A2AN08 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ubr4A2AN08 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC12.48□□□□□ -0.41
Ubr4A2AN08 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubr4A2AN08 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubr4A2AN08 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ubr4A2AN08 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubr4A2AN08 Gm45417-201ENSMUST00000209533 758 ntBASIC12.47□□□□□ -0.41
Ubr4A2AN08 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubr4A2AN08 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC12.46□□□□□ -0.41
Ubr4A2AN08 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ubr4A2AN08 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ubr4A2AN08 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ubr4A2AN08 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ubr4A2AN08 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ubr4A2AN08 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Ubr4A2AN08 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ubr4A2AN08 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ubr4A2AN08 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubr4A2AN08 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubr4A2AN08 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC12.45□□□□□ -0.42
Ubr4A2AN08 Gm12821-201ENSMUST00000120022 600 ntBASIC12.45□□□□□ -0.42
Ubr4A2AN08 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ubr4A2AN08 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubr4A2AN08 Gm22238-201ENSMUST00000175222 88 ntBASIC12.44□□□□□ -0.42
Ubr4A2AN08 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubr4A2AN08 Gm26833-201ENSMUST00000180899 440 ntBASIC12.44□□□□□ -0.42
Ubr4A2AN08 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC12.44□□□□□ -0.42
Ubr4A2AN08 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC12.44□□□□□ -0.42
Ubr4A2AN08 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ubr4A2AN08 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ubr4A2AN08 Gm37136-201ENSMUST00000194368 194 ntBASIC12.43□□□□□ -0.42
Ubr4A2AN08 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubr4A2AN08 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.43□□□□□ -0.42
Ubr4A2AN08 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubr4A2AN08 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ubr4A2AN08 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ubr4A2AN08 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC12.42□□□□□ -0.42
Ubr4A2AN08 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ubr4A2AN08 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC12.42□□□□□ -0.42
Ubr4A2AN08 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Ubr4A2AN08 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ubr4A2AN08 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ubr4A2AN08 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ubr4A2AN08 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ubr4A2AN08 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ubr4A2AN08 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubr4A2AN08 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubr4A2AN08 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubr4A2AN08 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC12.41□□□□□ -0.42
Ubr4A2AN08 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ubr4A2AN08 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ubr4A2AN08 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ubr4A2AN08 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.41□□□□□ -0.42
Ubr4A2AN08 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC12.41□□□□□ -0.42
Ubr4A2AN08 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubr4A2AN08 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubr4A2AN08 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubr4A2AN08 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubr4A2AN08 Gm9905-201ENSMUST00000065740 1845 ntBASIC12.4□□□□□ -0.42
Ubr4A2AN08 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ubr4A2AN08 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms