Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IsxA1A546 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IsxA1A546 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.95■□□□□ 0.94
IsxA1A546 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
IsxA1A546 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IsxA1A546 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IsxA1A546 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IsxA1A546 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IsxA1A546 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IsxA1A546 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IsxA1A546 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
IsxA1A546 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
IsxA1A546 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IsxA1A546 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
IsxA1A546 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IsxA1A546 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IsxA1A546 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
IsxA1A546 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IsxA1A546 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
IsxA1A546 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IsxA1A546 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
IsxA1A546 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.9■□□□□ 0.94
IsxA1A546 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
IsxA1A546 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IsxA1A546 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
IsxA1A546 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.9■□□□□ 0.94
IsxA1A546 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
IsxA1A546 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
IsxA1A546 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
IsxA1A546 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
IsxA1A546 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IsxA1A546 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IsxA1A546 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
IsxA1A546 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
IsxA1A546 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.88■□□□□ 0.93
IsxA1A546 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
IsxA1A546 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IsxA1A546 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
IsxA1A546 Notumos-201ENSMUST00000151998 2659 ntBASIC20.88■□□□□ 0.93
IsxA1A546 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
IsxA1A546 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
IsxA1A546 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IsxA1A546 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IsxA1A546 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IsxA1A546 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.86■□□□□ 0.93
IsxA1A546 Gm45855-201ENSMUST00000212546 880 ntBASIC20.86■□□□□ 0.93
IsxA1A546 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IsxA1A546 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
IsxA1A546 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.85■□□□□ 0.93
IsxA1A546 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IsxA1A546 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
IsxA1A546 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IsxA1A546 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
IsxA1A546 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IsxA1A546 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.84■□□□□ 0.93
IsxA1A546 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.84■□□□□ 0.93
IsxA1A546 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IsxA1A546 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
IsxA1A546 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
IsxA1A546 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
IsxA1A546 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
IsxA1A546 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
IsxA1A546 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.83■□□□□ 0.93
IsxA1A546 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
IsxA1A546 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
IsxA1A546 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IsxA1A546 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IsxA1A546 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.82■□□□□ 0.92
IsxA1A546 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
IsxA1A546 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
IsxA1A546 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IsxA1A546 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IsxA1A546 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
IsxA1A546 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IsxA1A546 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
IsxA1A546 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.81■□□□□ 0.92
IsxA1A546 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
IsxA1A546 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
IsxA1A546 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IsxA1A546 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IsxA1A546 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IsxA1A546 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
IsxA1A546 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
IsxA1A546 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IsxA1A546 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
IsxA1A546 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.79■□□□□ 0.92
IsxA1A546 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IsxA1A546 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IsxA1A546 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IsxA1A546 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
IsxA1A546 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
IsxA1A546 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
IsxA1A546 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
IsxA1A546 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IsxA1A546 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.77■□□□□ 0.92
IsxA1A546 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IsxA1A546 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IsxA1A546 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
IsxA1A546 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
IsxA1A546 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms