Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lnp1A0A1B0GSK3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lnp1A0A1B0GSK3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lnp1A0A1B0GSK3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.67■□□□□ 0.58
Lnp1A0A1B0GSK3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.67■□□□□ 0.58
Lnp1A0A1B0GSK3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lnp1A0A1B0GSK3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lnp1A0A1B0GSK3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Lnp1A0A1B0GSK3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lnp1A0A1B0GSK3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lnp1A0A1B0GSK3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lnp1A0A1B0GSK3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lnp1A0A1B0GSK3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.66■□□□□ 0.58
Lnp1A0A1B0GSK3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lnp1A0A1B0GSK3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Lnp1A0A1B0GSK3 Gm9812-201ENSMUST00000061934 968 ntBASIC18.65■□□□□ 0.58
Lnp1A0A1B0GSK3 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.65■□□□□ 0.58
Lnp1A0A1B0GSK3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lnp1A0A1B0GSK3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lnp1A0A1B0GSK3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.64■□□□□ 0.57
Lnp1A0A1B0GSK3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lnp1A0A1B0GSK3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lnp1A0A1B0GSK3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lnp1A0A1B0GSK3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lnp1A0A1B0GSK3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.63■□□□□ 0.57
Lnp1A0A1B0GSK3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lnp1A0A1B0GSK3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lnp1A0A1B0GSK3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lnp1A0A1B0GSK3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lnp1A0A1B0GSK3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lnp1A0A1B0GSK3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Lnp1A0A1B0GSK3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lnp1A0A1B0GSK3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lnp1A0A1B0GSK3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lnp1A0A1B0GSK3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lnp1A0A1B0GSK3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.61■□□□□ 0.57
Lnp1A0A1B0GSK3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.61■□□□□ 0.57
Lnp1A0A1B0GSK3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.61■□□□□ 0.57
Lnp1A0A1B0GSK3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.6■□□□□ 0.57
Lnp1A0A1B0GSK3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lnp1A0A1B0GSK3 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.6■□□□□ 0.57
Lnp1A0A1B0GSK3 Gm6311-201ENSMUST00000073790 878 ntBASIC18.6■□□□□ 0.57
Lnp1A0A1B0GSK3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lnp1A0A1B0GSK3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lnp1A0A1B0GSK3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.59■□□□□ 0.57
Lnp1A0A1B0GSK3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.59■□□□□ 0.57
Lnp1A0A1B0GSK3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lnp1A0A1B0GSK3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Lnp1A0A1B0GSK3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lnp1A0A1B0GSK3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Lnp1A0A1B0GSK3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Lnp1A0A1B0GSK3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lnp1A0A1B0GSK3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lnp1A0A1B0GSK3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Lnp1A0A1B0GSK3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.57■□□□□ 0.56
Lnp1A0A1B0GSK3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lnp1A0A1B0GSK3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.57■□□□□ 0.56
Lnp1A0A1B0GSK3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lnp1A0A1B0GSK3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Lnp1A0A1B0GSK3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lnp1A0A1B0GSK3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lnp1A0A1B0GSK3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lnp1A0A1B0GSK3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lnp1A0A1B0GSK3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lnp1A0A1B0GSK3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lnp1A0A1B0GSK3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Lnp1A0A1B0GSK3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lnp1A0A1B0GSK3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.55■□□□□ 0.56
Lnp1A0A1B0GSK3 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.55■□□□□ 0.56
Lnp1A0A1B0GSK3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lnp1A0A1B0GSK3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lnp1A0A1B0GSK3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lnp1A0A1B0GSK3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.55■□□□□ 0.56
Lnp1A0A1B0GSK3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lnp1A0A1B0GSK3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lnp1A0A1B0GSK3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lnp1A0A1B0GSK3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lnp1A0A1B0GSK3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lnp1A0A1B0GSK3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lnp1A0A1B0GSK3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lnp1A0A1B0GSK3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lnp1A0A1B0GSK3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Lnp1A0A1B0GSK3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lnp1A0A1B0GSK3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lnp1A0A1B0GSK3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lnp1A0A1B0GSK3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lnp1A0A1B0GSK3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lnp1A0A1B0GSK3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lnp1A0A1B0GSK3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lnp1A0A1B0GSK3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lnp1A0A1B0GSK3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lnp1A0A1B0GSK3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Lnp1A0A1B0GSK3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Lnp1A0A1B0GSK3 Terc-201ENSMUST00000082862 423 ntBASIC18.53■□□□□ 0.56
Lnp1A0A1B0GSK3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lnp1A0A1B0GSK3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Lnp1A0A1B0GSK3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.53■□□□□ 0.56
Lnp1A0A1B0GSK3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lnp1A0A1B0GSK3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lnp1A0A1B0GSK3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms