Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm3880A0A1B0GSB3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Gm3880A0A1B0GSB3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm3880A0A1B0GSB3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm3880A0A1B0GSB3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3880A0A1B0GSB3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3880A0A1B0GSB3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3880A0A1B0GSB3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3880A0A1B0GSB3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3880A0A1B0GSB3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3880A0A1B0GSB3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3880A0A1B0GSB3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3880A0A1B0GSB3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3880A0A1B0GSB3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3880A0A1B0GSB3 Gm13042-201ENSMUST00000119244 1955 ntBASIC11.31□□□□□ -0.6
Gm3880A0A1B0GSB3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Gm3880A0A1B0GSB3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC11.31□□□□□ -0.6
Gm3880A0A1B0GSB3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3880A0A1B0GSB3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3880A0A1B0GSB3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Gm3880A0A1B0GSB3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Gm3880A0A1B0GSB3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3880A0A1B0GSB3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3880A0A1B0GSB3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm3880A0A1B0GSB3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Gm3880A0A1B0GSB3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm3880A0A1B0GSB3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm3880A0A1B0GSB3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm3880A0A1B0GSB3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm3880A0A1B0GSB3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm3880A0A1B0GSB3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC11.3□□□□□ -0.6
Gm3880A0A1B0GSB3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm3880A0A1B0GSB3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Gm3880A0A1B0GSB3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Gm3880A0A1B0GSB3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm3880A0A1B0GSB3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm3880A0A1B0GSB3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm3880A0A1B0GSB3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm3880A0A1B0GSB3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC11.29□□□□□ -0.6
Gm3880A0A1B0GSB3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm3880A0A1B0GSB3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Gm3880A0A1B0GSB3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm3880A0A1B0GSB3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm3880A0A1B0GSB3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm3880A0A1B0GSB3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm3880A0A1B0GSB3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC11.27□□□□□ -0.6
Gm3880A0A1B0GSB3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3880A0A1B0GSB3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3880A0A1B0GSB3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC11.27□□□□□ -0.61
Gm3880A0A1B0GSB3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3880A0A1B0GSB3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
Gm3880A0A1B0GSB3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3880A0A1B0GSB3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Gm3880A0A1B0GSB3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Gm3880A0A1B0GSB3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Gm3880A0A1B0GSB3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3880A0A1B0GSB3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3880A0A1B0GSB3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3880A0A1B0GSB3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Gm3880A0A1B0GSB3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3880A0A1B0GSB3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm3880A0A1B0GSB3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm3880A0A1B0GSB3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Gm3880A0A1B0GSB3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm3880A0A1B0GSB3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm3880A0A1B0GSB3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm3880A0A1B0GSB3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC11.25□□□□□ -0.61
Gm3880A0A1B0GSB3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm3880A0A1B0GSB3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Gm3880A0A1B0GSB3 Dmtn-209ENSMUST00000228295 2572 ntBASIC11.25□□□□□ -0.61
Gm3880A0A1B0GSB3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm3880A0A1B0GSB3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Gm3880A0A1B0GSB3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm3880A0A1B0GSB3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm3880A0A1B0GSB3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm3880A0A1B0GSB3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm3880A0A1B0GSB3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm3880A0A1B0GSB3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm3880A0A1B0GSB3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm3880A0A1B0GSB3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm3880A0A1B0GSB3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm3880A0A1B0GSB3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm3880A0A1B0GSB3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3880A0A1B0GSB3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3880A0A1B0GSB3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3880A0A1B0GSB3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Gm3880A0A1B0GSB3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC11.23□□□□□ -0.61
Gm3880A0A1B0GSB3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3880A0A1B0GSB3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3880A0A1B0GSB3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Gm3880A0A1B0GSB3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3880A0A1B0GSB3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3880A0A1B0GSB3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Gm3880A0A1B0GSB3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC11.22□□□□□ -0.61
Gm3880A0A1B0GSB3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3880A0A1B0GSB3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3880A0A1B0GSB3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3880A0A1B0GSB3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3880A0A1B0GSB3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3880A0A1B0GSB3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms